Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi608g00005 ATGTATATTATACAGGGTGTTACAAGGAGTCATTTCTATGGATATGGCCTTCCAACTTTATCTTGGAAACAAAGCTTGAATGTTTGCATTGAAGCTTCAAGAGGACGCCATTTTCTTCATACTTCCTATGTTACACCTGTCATTCACCACGATGTGAAATCCGTTAATATTTTATTGGACGGTAATCTCAATGCCATAGTAGTATATTTTGGAATATCAAGAATCGGTCCCAATGAGGATCAAACTCGTGTCAGTACTGTCGTCAAGGATACTGTTGGATACCGCGATTCCAGGTACTCTATGAGAGAGAAATTTATGGAAAAATCTGATGTTAATTCATTTGGAGTTGTCCTGATTGAAAAGCTCTATGTCAGTCCTGTCATTGATCCAATACTTCTTAGTGATGAGATCAATTGTTGA 420 0.3738 MYIIQGVTRSHFYGYGLPTLSWKQSLNVCIEASRGRHFLHTSYVTPVIHHDVKSVNILLDGNLNAIVVYFGISRIGPNEDQTRVSTVVKDTVGYRDSRYSMREKFMEKSDVNSFGVVLIEKLYVSPVIDPILLSDEINC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi608g00005 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi608g00005 139 PANTHER OS07G0166700 PROTEIN 2 129 IPR045272 GO:0004714|GO:0006468
Vivi608g00005 139 SUPERFAMILY Protein kinase-like (PK-like) 13 123 IPR011009 -
Vivi608g00005 139 Gene3D Transferase(Phosphotransferase) domain 1 9 136 - -
Vivi608g00005 139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Vivi608g00005 139 Pfam Protein tyrosine and serine/threonine kinase 19 121 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi608g00005 2 138 Receptor kinase-like Gene Family AT3G46290 55.474 9.66e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi608g00005 PK_Tyr_Ser-Thr 3.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi608g00005 - - vvo:131633989 283.108