Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi605g00009 ATGGAGGAAGTTGAACAAGCTAGTAGAACAGCTGTTGAAAGCTGTCATAGAGTTCTGAGTATGTTGTCTCAACCAAGAGATGAAGTTCATCATAAGAATTTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATGATGGTATGGGTCATGCAAGAGTTAGGAAATTTAGGAATCAGAGACAAGTTCCTTTTCCTCAAAATGTTTTCTTGGACAATCCGGTTTGCAAGAAACCGAATAACCATCACACCAAGAAGGTTCACTTTAGTCAAATTACTTATCCTGAGAATTCGGGTCAGGAGCTTGCATTGATCGTGCGAAACCCAAACACTTCGTTGGAATTGAGCTCGAATGGGAAAAGTCCTCTTCCCCTTGCTCAACAAGCTGGGTCGAGTCAGTCGACTCACTATCAGTTCTTTCAGCAGCAGCAGCAGCAGAGGTTAATGATGCAGCAGCAGCAGCAACAGCACCAGCACCAGCAGCAGCAACAGCACCAGCACCAGCAGCAGCAACAGCACCAGCAGCAGCAGCAGCAAATGAAGCATCAAGCGGAAATGATGTTTCGAAGGAACATTAACAGCATAAACCTTAGCTTTGACAACACTACTAGTGGCACACCGACAATGTCGTCTACTAGGTCTTTCATTTCGTCGTTGAGCATAGACGGAAGTGTTGCTAACTTGGATGGAAGTCAGTTCCATTTAGTAGGAGCTCCGATCTCTTCGGATCAGAATTCGCAACAGCACAAGAGAAAATGTTCTGCTAGAGGCGACGAGGGAAATCTGAGATGTGGCAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAACTTGCTGATATCCCTCCTGATGATTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGCTCTCCTCACCCGAGGGGATATTATAAGTGCAGCAGTATGAGAGGATGCCCGGCTAGGAAGCATGTGGAGAGGTGCTTGGAAGAGCCTACTATGCTAATTGTTACCTATGAAGGGGAGCATAATCACCCCAAGGTACCAACTCAATCTGCAAATGCATGA 1119 0.4576 MEEVEQASRTAVESCHRVLSMLSQPRDEVHHKNLMVETGEAVNRFKKVVSLLHDGMGHARVRKFRNQRQVPFPQNVFLDNPVCKKPNNHHTKKVHFSQITYPENSGQELALIVRNPNTSLELSSNGKSPLPLAQQAGSSQSTHYQFFQQQQQQRLMMQQQQQQHQHQQQQQHQHQQQQQHQQQQQQMKHQAEMMFRRNINSINLSFDNTTSGTPTMSSTRSFISSLSIDGSVANLDGSQFHLVGAPISSDQNSQQHKRKCSARGDEGNLRCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKVPTQSANA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi605g00009 372 FunFam WRKY transcription factor 65 288 365 - -
Vivi605g00009 372 Pfam Plant zinc cluster domain 257 302 IPR018872 -
Vivi605g00009 372 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 369 IPR044810 GO:0003700
Vivi605g00009 372 MobiDBLite consensus disorder prediction 120 190 - -
Vivi605g00009 372 Pfam WRKY DNA -binding domain 306 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi605g00009 372 SMART WRKY_cls 304 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi605g00009 372 SUPERFAMILY WRKY DNA-binding domain 302 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi605g00009 372 Coils Coil 157 177 - -
Vivi605g00009 372 Gene3D WRKY domain 291 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi605g00009 372 ProSiteProfiles WRKY domain profile. 299 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi605g00009 1 369 WRKY Transcription Factor Family AT2G30590 59.173 4.20e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi605g00009 WRKY 5.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi605g00009 - - tpra:123924038 524.628