Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi605g00007 ATGGCAACAAAAACCTCCAAACCACTTGCTTCACATCCTACATATGAAGAGATGATTAAGGAAGCGATTGCGGGGCTGAAAGAGAGAACAGGTTCAAGCCAATACGCGATTGCGAAATTCATCGAAGAGAAACACAAACAGCTTCCTTCAACCTTCAAGAAGCTATTGCTTCAGAATTTGAAGAAGAATGTTGCTTCTGGAAAGCTTGTTAAGGTTAAAGGCTCATTCAAGCTTGCTCCGGCGACGAAACCGGCACCGGCGACGAAAAAGCCCGCAGTCGCGAAGTCGAAAACAAAACCGGCTGCTAAGGTGACACCGGCGAAGGCCAAGCCAGCCGCTAAGCCGAAGGCGAAAGCTGTTGTTAAGGAGAAGGCTGATGTGAAACCGAAGGCTAAGGCTGCGAGGACGTCGACGAGAACGACGCCGGGGATAAAGGTTGCTGTTGCGAAGGCGGTGGTGAAGAAAGCTGTGGCGGCGAAGAAAACTCCGGTGAGGATTAAGGAACTTAAAAAAGTGAAGACTCCAGCGGTGTTGAAGGAAGCTGTGGCGGCGAAGAAAACTCCGGTGAAGATTAAGGAACTTAAAAATGTGAAGACTCCGGCGGTGTTGAAAGTTACGACGAAGAGAGGTGGAAGAAAATAG 642 0.4907 MATKTSKPLASHPTYEEMIKEAIAGLKERTGSSQYAIAKFIEEKHKQLPSTFKKLLLQNLKKNVASGKLVKVKGSFKLAPATKPAPATKKPAVAKSKTKPAAKVTPAKAKPAAKPKAKAVVKEKADVKPKAKAARTSTRTTPGIKVAVAKAVVKKAVAAKKTPVRIKELKKVKTPAVLKEAVAAKKTPVKIKELKNVKTPAVLKVTTKRGGRK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi605g00007 213 Gene3D - 7 92 IPR036388 -
Vivi605g00007 213 CDD H15 10 91 IPR005818 GO:0000786|GO:0003677|GO:0006334
Vivi605g00007 213 SMART h15plus2 9 75 IPR005818 GO:0000786|GO:0003677|GO:0006334
Vivi605g00007 213 Coils Coil 212 213 - -
Vivi605g00007 213 SUPERFAMILY "Winged helix" DNA-binding domain 10 90 IPR036390 -
Vivi605g00007 213 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Vivi605g00007 213 MobiDBLite consensus disorder prediction 116 133 - -
Vivi605g00007 213 MobiDBLite consensus disorder prediction 81 141 - -
Vivi605g00007 213 Pfam linker histone H1 and H5 family 12 79 IPR005818 GO:0000786|GO:0003677|GO:0006334
Vivi605g00007 213 PANTHER HISTONE H1 5 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi605g00007 13 97 Single Myb Histone (SMH) Gene Family AT1G72740 32.941 3.90e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi605g00007 K11275 - vvo:131633962 125.561