Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi605g00001 ATGGCAGAGGTGATAGGTACTTTCATATTGATGTTTTGTGTGTGTGGAATCATTTCAAGCACACAACACCAAGACAATGCAGTGGGTCTTCTAGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGATAATTTTTTCTATTGGCCAAATTTCTTGTGCTCATGTTAACCCAGCTATCACAATTGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCGATTTACATAATAGCACAAACAATAGGTTCTTTGGTGGCAACATATATTGGTAGCCTTGTCTATGGAATAAAATCAGATGTTATGATGACTCAACCACTCCAAGGTTGCAACTCTGCGTTTTGGGCGGAGCTTATTGCATCATTCATCATCATGTTTTTGGTTACAGCTTTGACATCTGAACCTCAATCTGTATCAGTAAGTACTAATTAA 438 0.3858 MAEVIGTFILMFCVCGIISSTQHQDNAVGLLEYAATAGLTVVVIIFSIGQISCAHVNPAITIAFATIGQFPWFKVPIYIIAQTIGSLVATYIGSLVYGIKSDVMMTQPLQGCNSAFWAELIASFIIMFLVTALTSEPQSVSVSTN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi605g00001 145 Gene3D Glycerol uptake facilitator protein. 1 144 IPR023271 -
Vivi605g00001 145 Pfam Major intrinsic protein 1 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi605g00001 145 PRINTS Major intrinsic protein family signature 37 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi605g00001 145 PRINTS Major intrinsic protein family signature 118 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi605g00001 145 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi605g00001 145 PANTHER AQUAPORIN NIP2-1 1 140 IPR034294 -
Vivi605g00001 145 SUPERFAMILY Aquaporin-like 1 140 IPR023271 -
Vivi605g00001 145 ProSitePatterns MIP family signature. 55 63 IPR022357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi605g00001 1 140 Major Intrinsic Protein MIP AT4G18910 39.189 2.05e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi605g00001 K09874 - gmx:100817660 242.662