Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi604g00004 ATGGCTGATTTTCAGACATCTACCCACCGAGCCAGGTGGATCTTTACTCCACAACAACTGGTTGAGAAATATACAGCTGCTAATCAGAGAGCCAGACAAACCCTAGAGAAGTGTGGAGCAAGTCTAATGGAAGTAGATAGTAATGGGTCTTTGTCATATCCTGAACCCCAGACGACCGCAAGCGATAGTGCTGAAAAACATTCTCGGGTAAAACCTCTTAGTAATGAAGAAGAACGGTGTATGAAGGTATTTTATGAAATCAAGCTACAAGAAGTGTGCAACAATTTCCACTTCCCTCATAAGATCCAGGCTACAGCCCTCATATTTTTTAAAAGGTTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCTGCTGAGGAGCTTGGTAAGGGGATTTCGCAAGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTCTGGATTTTGATCTTATAGTTTATGCTCCATATCGCTCGGTTGAAGGTTTTACAGATTATATGGAGGAATTTTGCAATGCTGGCGAGGATGAGCTTCCAAAATTCAAGGCTTTGCAAGATACGGCAGGGCGGGAAGTTGATAAAATGATGCTTACAGATGCACCACTCTTATTTACTCCTGGGCAGTTGGCCTTGGCCGCTCTACGTACCTCAAATGCACTCCATAAAGTTGTCGACTTTGATAGTTTTCTGAGCAGAGTTTTTTCCCTTAAGAATTCTACACACACAATGGACGAACTTCTTGAATCATTGGATGCAATTGATTCTTGGGTTAGAAAATACGTTAGTCCTTCAGAGAAGGAATTGAAGCATATCGACCGGAAAGTAAAGTCTTGTTGGGGTCATAGCTCTCATGACGACGGAAAGAAGAGAGAGAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAAAGAAGCACAAAATGTGTAG 996 0.4086 MADFQTSTHRARWIFTPQQLVEKYTAANQRARQTLEKCGASLMEVDSNGSLSYPEPQTTASDSAEKHSRVKPLSNEEERCMKVFYEIKLQEVCNNFHFPHKIQATALIFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLDFDLIVYAPYRSVEGFTDYMEEFCNAGEDELPKFKALQDTAGREVDKMMLTDAPLLFTPGQLALAALRTSNALHKVVDFDSFLSRVFSLKNSTHTMDELLESLDAIDSWVRKYVSPSEKELKHIDRKVKSCWGHSSHDDGKKREKKSKHKSRKSSKEAQNV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi604g00004 331 Gene3D - 177 282 - -
Vivi604g00004 331 MobiDBLite consensus disorder prediction 301 331 - -
Vivi604g00004 331 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Vivi604g00004 331 PANTHER CYCLIN 31 324 IPR043198 GO:0006357|GO:0016538
Vivi604g00004 331 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Vivi604g00004 331 MobiDBLite consensus disorder prediction 47 72 - -
Vivi604g00004 331 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Vivi604g00004 331 FunFam Cyclin h 177 282 - -
Vivi604g00004 331 SMART cyclin_7 87 168 IPR013763 -
Vivi604g00004 331 MobiDBLite consensus disorder prediction 47 61 - -
Vivi604g00004 331 Gene3D - 63 175 - -
Vivi604g00004 331 FunFam cyclin-H1-1 63 175 - -
Vivi604g00004 331 Pfam Cyclin C-terminal domain 179 275 IPR031658 -
Vivi604g00004 331 Pfam Cyclin, N-terminal domain 70 174 IPR006671 -
Vivi604g00004 331 CDD CYCLIN_AcCycH_rpt2 177 304 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi604g00004 1 280 Core Cell Cycle Gene Families AT5G27620 63.929 2.13e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi604g00004 K06634 - gmx:547736 550.051