Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi603g00005 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGATTCAGAAGAAGCAGGAGAAGAAACAGATCAGAATGAAGAAGATGATAAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAATAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGTGCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCCTGTATCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAACCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACAGGGGAAGACTCAAAGAAGATGACTCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAATTGGTCGGATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGTGACTACCGAACAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGTAATACTGAAGGCAATAATAACGTAGGCAATGAAGGTGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTGTAGATTTGATGAAGCTCCGGGGTTATCCTTGTTGAACATGAATGCTATGGAAAGGGGAATAGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACCCGGGGGCAACTGATTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1158 0.4603 MAPPKRLRITPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEEDSEEAGEETDQNEEDDKDEDEGSSSEEEQVQPPSNNPPPSTPISNPKPDSGSESESGAESDSEQEPTPPNAKVKPPVSARSGTKRANENGSKPAKKKTTGAGGGSENEADGDGDVKMTGEDSKKMTQRVFTEGDEIAILKGLADFISKTGKDPMKELVGFHSFVKKSIHGDVTTEQLKRKVRGLKMKFKDGGSFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGKDEGGVDRSLALSEMCRFDEAPGLSLLNMNAMERGIGLLEESMVDEFNEGWRKVQIAEMELFVTRGQLITDQARIALDALKKTR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi603g00005 385 MobiDBLite consensus disorder prediction 250 303 - -
Vivi603g00005 385 Pfam Protein of unknown function, DUF573 169 253 IPR007592 GO:0006355
Vivi603g00005 385 MobiDBLite consensus disorder prediction 267 289 - -
Vivi603g00005 385 MobiDBLite consensus disorder prediction 252 266 - -
Vivi603g00005 385 PANTHER BNAANNG10740D PROTEIN-RELATED 87 380 IPR007592 GO:0006355
Vivi603g00005 385 MobiDBLite consensus disorder prediction 88 109 - -
Vivi603g00005 385 MobiDBLite consensus disorder prediction 1 167 - -
Vivi603g00005 385 MobiDBLite consensus disorder prediction 36 68 - -
Vivi603g00005 385 MobiDBLite consensus disorder prediction 151 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi603g00005 8 382 GeBP Transcription Factor Family AT1G61730 28.256 6.94e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi603g00005 DUF573 8.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi603g00005 - - vvo:131633905 578.556