Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi603g00004 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGATTCAGAAGAAGAAACTGATCAGAATGAAGAAGATGATAAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAATAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGTGCCGAATCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCCTGTACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAACCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACAGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAATTGGTCGGATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGTGACTACCGAACAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAAAGTTTTTGAACTTTCCAAAAAGGTTTGGGGTAATACTGAAGGCAATAATAACGTAGTCAATGAAGGTGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTGTAGATTTGGTGAAGCTCCGGGGTTATCCTTGTTGAACATGAATGCTATGGAAAGGGGAATAGGATTGTTGGAAGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACCCGGGGGCAACTGATTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1185 0.4574 MAPPKRLRITPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEEDSEEETDQNEEDDKDEDEGSSSEEEQVQPPSNNPPPSTPISNPKPDSGSESESGAESESDSEQEPTPPNAKVKPPVPARSGTKRANENGSKPAKKKTTGAGGGSENEADGDGDVKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKELVGFHSFVKKSIHGDVTTEQLKRKVRGLKMKFKDGGGLKMKFKDGGSFTKEHDKKVFELSKKVWGNTEGNNNVVNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGKDEGGVDRSLALSEMCRFGEAPGLSLLNMNAMERGIGLLEESMVDEFNEGWRKVQIAEMELFVTRGQLITDQARIALDALKKTR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi603g00004 394 MobiDBLite consensus disorder prediction 36 65 - -
Vivi603g00004 394 MobiDBLite consensus disorder prediction 1 166 - -
Vivi603g00004 394 MobiDBLite consensus disorder prediction 150 166 - -
Vivi603g00004 394 Pfam Protein of unknown function, DUF573 168 262 IPR007592 GO:0006355
Vivi603g00004 394 PANTHER BNAANNG10740D PROTEIN-RELATED 38 389 IPR007592 GO:0006355
Vivi603g00004 394 MobiDBLite consensus disorder prediction 265 313 - -
Vivi603g00004 394 MobiDBLite consensus disorder prediction 276 298 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi603g00004 106 390 GeBP Transcription Factor Family AT4G25210 30.592 8.02e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi603g00004 DUF573 1.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi603g00004 - - vvo:131633905 605.905