Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi603g00003 ATGGCACCACCAAAGCGACTCCGCATCTCTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGATTCAGAAGAAGAAACTGATCAGAATGAAGAAGATGATAAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAATAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGGGCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCCTGTACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAACCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACCTGAAAATGACAGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAATTGGTCGGATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGTGACTACCGAACAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGTAATACTGAAGGCAATAATAACGTAGGCAATGAAGGTGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTGTAGATTTGGTGAAGCTCCGGGGTTATCCTTGTTGAACATGAATGCTATGGAAAGGGGAATAGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGGCCCGGGGGCAACTGATTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1149 0.4621 MAPPKRLRISPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEEDSEEETDQNEEDDKDEDEGSSSEEEQVQPPSNNPPPSTPISNPKPDSGSESESGAESDSEQEPTPPNAKVKPPVPARSGTKRANENGSKPAKKKTTGAGGGSENEADGDGDLKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKELVGFHSFVKKSIHGDVTTEQLKRKVRGLKMKFKDGGSFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGKDEGGVDRSLALSEMCRFGEAPGLSLLNMNAMERGIGLLEESMVDEFNEGWRKVQIAEMELFVARGQLITDQARIALDALKKTR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi603g00003 382 MobiDBLite consensus disorder prediction 1 165 - -
Vivi603g00003 382 MobiDBLite consensus disorder prediction 85 106 - -
Vivi603g00003 382 MobiDBLite consensus disorder prediction 36 65 - -
Vivi603g00003 382 Pfam Protein of unknown function, DUF573 166 250 IPR007592 GO:0006355
Vivi603g00003 382 MobiDBLite consensus disorder prediction 148 165 - -
Vivi603g00003 382 MobiDBLite consensus disorder prediction 247 300 - -
Vivi603g00003 382 MobiDBLite consensus disorder prediction 249 263 - -
Vivi603g00003 382 PANTHER BNAANNG10740D PROTEIN-RELATED 39 377 IPR007592 GO:0006355
Vivi603g00003 382 MobiDBLite consensus disorder prediction 264 286 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi603g00003 8 379 GeBP Transcription Factor Family AT1G61730 27.723 7.40e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi603g00003 DUF573 9.6e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi603g00003 - - vvo:131633905 565.844