Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi603g00002 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCTATGAAGAAGAAGATTCCGAAGAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCGAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGTGCCGAATCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAGCCCAACCACAAGCCCAAGCCCAATCTACTCCTGTACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACAGTTCCAAACCTGCTAAGAAGAAAACAACCGCCGCCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACAGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAACTGGTCGAATTTCATAGTTTTGTGAATAAATCTATTCACGGGGACGTGACTACCGAACAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAACGACGGTGGTGGTTTGAAGATGAAGTTCAGTGGTGGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATAACGTAGGCAATGAAGGTGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAATGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTCTAGATTGGGTGAAGCTGCGGGGTTACCCTTGAATGCTATGGAAAGGGGAATGGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTGACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACCCGGTGGCAACTGTTTACGGATCAGGCTAGGATAACATTGGACGCGTTGAAGAAGACGCGTTGA 1188 0.4739 MAPPKRLRITPLDDPPTASDDDQPPSSKKPEDEVVYEEEDSEEDEDEGSSSEEEQVQPPSENPPPSTPISNPKPDSGSESESGAESESDSEQEPTPPNAKVKPLASKPMKAQPQAQAQSTPVPARSGTKRANENSSKPAKKKTTAAGAGGGSENEADGDGDVKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKELVEFHSFVNKSIHGDVTTEQLKRKVRGLKMKFNDGGGLKMKFSGGFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGNDEGGVDRSLALSEMSRLGEAAGLPLNAMERGMGLLEESMVDEFDEGWRKVQIAEMELFVTRWQLFTDQARITLDALKKTR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi603g00002 395 MobiDBLite consensus disorder prediction 111 141 - -
Vivi603g00002 395 MobiDBLite consensus disorder prediction 156 172 - -
Vivi603g00002 395 Pfam Protein of unknown function, DUF573 174 266 IPR007592 GO:0006355
Vivi603g00002 395 MobiDBLite consensus disorder prediction 1 172 - -
Vivi603g00002 395 MobiDBLite consensus disorder prediction 280 302 - -
Vivi603g00002 395 MobiDBLite consensus disorder prediction 35 52 - -
Vivi603g00002 395 PANTHER BNAANNG10740D PROTEIN-RELATED 39 390 IPR007592 GO:0006355
Vivi603g00002 395 MobiDBLite consensus disorder prediction 266 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi603g00002 8 392 GeBP Transcription Factor Family AT1G61730 28.954 2.73e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi603g00002 DUF573 4.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi603g00002 - - vvo:131633905 540.036