Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi602g00009 ATGCCTATGGCTGTGCACTCAAAACAGATGTTGCTGCTGCTGGTGGTGGTCTTTTTTGCAAAAGTAGCTACTCAGTTAATATCTATGCCAAACTGTCCAACAAAGTGTGGCTCTGTCTCCATTCCATTCCCATTTGGAACCACCAAGGATTGTTCCTTAGACAACACGTTTCTCATCAATTGCAACAAAACATCTTCATCTTCAATCTCAACACAAGTACCTTCCTTGCCATATAGTAATCAAACTATCCTAAACATCTCACTAAACGGCGAACTTCACGTTGCATGGCCAGTAGCCAGAGATTGCTATACTGAAAATAGAAAAATTGTGAACCAAACATATTGGGGTATGGATATAAATCATTTTTCCATCTCGTCAACTCGAAACAAGTTGGTCGCGGTTGGCTGTGACACGATTGGAGCCCTCTCGGCATTTGATTACGGGGGAAACAACTACACCACAGGATGTGTGGCTTTGTGTAACAGGCTTAATGATATTGTGGCCAACGAATCTTGCTCCGGCACTGGTTGTTGCGAGATTTCAATACCCCGAGGTCATGTGTTGAATAAAGTAGCCTATACTTCTGGAAGTGTATTCAGCAATCACTCTGCAGTACATGACTTCAATCCCTGTGGTTATGCGTTTTTGGTTGAAAACGGAGCCTACAACTTCAAATCCACAGACATCCTCAAGTTGGAGAAGAAGGAGTTTCCTGTGTTGTTGGACTGGGCGGTAGGGAACCAAACATGCCAGCAAGCTCAGAAGGATCTTTCAAGTTATGCATGTAAGGACAACAAAAGTACATGTTATGATGCAACTGAGAGATCTGGTTACCTTTGTAGATGCTTTCATGGATATTGGGGAAACCCTTACCTCATTCACGGATGCCAAGATATTAATGAATGCATGGAGTCCAATGACTGCGTTGAGGGAGCAACATGCATCAATCTTCCTGGAAGCTATGATTGTTTATGTCCTGCAGAATATGAGGGAAACGGGAAGATGAACGGAACAAAATGCAGCCCAAAATCCAGTACCAACAAAACAAGGAAAGAGATCATATTAATCATTGCATTGAGTGTGAGCATAAGTTTCGCAGCACTACTGGTGGGAAGCTTTTATGCGTATTTGGCATTGAAGAAAAGAAGGCTCATTAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCATACTGTTACAACAAAAGATAGTGAGGCGTGGAAAGTCAGCTGAAACAGCGAAAGTATTCACGGTTGAGGAGCTAAATGAAGCAACCAACAACTTCGACGAAAGCAAGATCCTAGGCCAAGGTGGTCAGGGAACAGTTTATAAAGGAGTTTTAGCAGATAAAAGAATTGTAGCAATAAAGAAATCAAAAATCAGTGACAGAAAGCAGATTGAGCCGTTCATCAATGAAGTGATCGTGCTTTCCCAAATCAACCATCGAAATGTGGTAAGGCTATTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTCGTTTATGAATTCATTTCTAATGGTACTGTTTACGAGCATCTTCATGATCAAAACCAATCTTTAAAGCTTACTTGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCTTGGCATACTTGCATTCTGCTGCATCTACGCCAATCATACATAGAGATGTGAAATCTTCAAATATACTCCTAGATCACAATCTCATCGCAAAGGTTTCTGACTTTGGAGCTTCTAGGATGGTTCCTCTTGATCATACCCAGGTAACCACTCTAGTGCAAGGGACATTGGGGTATCTTGACCCAGAATATTTCCACACAAGTCAGTTGACAGAGAAAAGTGACGTATATAGCTTTGGGGTTGTCCTAGCAGAGCTACTTACGGGAAAGAAGGCACTATCTTTTAGCAGGCCAGAGGAAGATAGAAACCTCGCAGTGTACTTTATTTCTTCGATGAAAAAGGGTCGGGTACTTCATATTTTGGACAAAAATTTAGACGGGGCTAATACCGAGCAACTAAAGGAAGTTGCCCGTATTGCAGAAAGGTGTTTAAGGGTGAAGGGCGAGGAAAGACCAACCATGAAAGAAGTGGCAATGGAATTAGAAGGAATATTAGTTTTTGAAGAGCACCGTTGGGCAAGTAACAATTTGTCTTCAGAAGAGACTGACAACTTGCTCAGAGAAACGTCGTCGGTTATCAATGTTGAAGATGGTGGCCTTAATTCCTCGGACTCATATAGTATAAACCAGATTACGATGTCAACGATTGGTGGAAGATGA 2271 0.4157 MPMAVHSKQMLLLLVVVFFAKVATQLISMPNCPTKCGSVSIPFPFGTTKDCSLDNTFLINCNKTSSSSISTQVPSLPYSNQTILNISLNGELHVAWPVARDCYTENRKIVNQTYWGMDINHFSISSTRNKLVAVGCDTIGALSAFDYGGNNYTTGCVALCNRLNDIVANESCSGTGCCEISIPRGHVLNKVAYTSGSVFSNHSAVHDFNPCGYAFLVENGAYNFKSTDILKLEKKEFPVLLDWAVGNQTCQQAQKDLSSYACKDNKSTCYDATERSGYLCRCFHGYWGNPYLIHGCQDINECMESNDCVEGATCINLPGSYDCLCPAEYEGNGKMNGTKCSPKSSTNKTRKEIILIIALSVSISFAALLVGSFYAYLALKKRRLIKLKEQFFQQNGGILLQQKIVRRGKSAETAKVFTVEELNEATNNFDESKILGQGGQGTVYKGVLADKRIVAIKKSKISDRKQIEPFINEVIVLSQINHRNVVRLLGCCLETEVPLLVYEFISNGTVYEHLHDQNQSLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSSNILLDHNLIAKVSDFGASRMVPLDHTQVTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFSRPEEDRNLAVYFISSMKKGRVLHILDKNLDGANTEQLKEVARIAERCLRVKGEERPTMKEVAMELEGILVFEEHRWASNNLSSEETDNLLRETSSVINVEDGGLNSSDSYSINQITMSTIGGR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi602g00009 756 ProSitePatterns Calcium-binding EGF-like domain signature. 298 323 IPR018097 GO:0005509
Vivi602g00009 756 CDD EGF_CA 298 331 - -
Vivi602g00009 756 SMART egf_5 301 341 IPR000742 -
Vivi602g00009 756 SMART egf_5 249 297 IPR000742 -
Vivi602g00009 756 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
Vivi602g00009 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 702 IPR045274 GO:0007166
Vivi602g00009 756 SUPERFAMILY Protein kinase-like (PK-like) 413 698 IPR011009 -
Vivi602g00009 756 FunFam Fibrillin 2 293 340 - -
Vivi602g00009 756 Gene3D Laminin 247 340 - -
Vivi602g00009 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Vivi602g00009 756 Pfam Calcium-binding EGF domain 298 340 IPR001881 GO:0005509
Vivi602g00009 756 Gene3D Phosphorylase Kinase; domain 1 404 504 - -
Vivi602g00009 756 Gene3D Transferase(Phosphotransferase) domain 1 505 722 - -
Vivi602g00009 756 SMART serkin_6 429 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi602g00009 756 Pfam Protein kinase domain 430 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi602g00009 756 Pfam Wall-associated receptor kinase galacturonan-binding 32 88 IPR025287 GO:0030247
Vivi602g00009 756 ProSiteProfiles EGF-like domain profile. 298 341 IPR000742 -
Vivi602g00009 756 SUPERFAMILY EGF/Laminin 297 333 - -
Vivi602g00009 756 SMART egfca_6 298 341 IPR001881 GO:0005509
Vivi602g00009 756 FunFam Wall-associated receptor kinase 2 505 721 - -
Vivi602g00009 756 ProSiteProfiles Protein kinase domain profile. 429 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi602g00009 756 FunFam Wall-associated receptor kinase 2 399 504 - -
Vivi602g00009 756 CDD STKc_IRAK 435 701 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi602g00009 3 710 Receptor kinase-like Gene Family AT1G21230 47.850 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi602g00009 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi602g00009 - - mtr:25489730 1019.22