Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06668 ATGAGAACCCAACGCCCTCACCAACTCTTCCTATTTTCCATCATCTTCTTCGCATCTACATTCTCATATCTCCAATCAGTAACCGCCACCGGAGAACAACCTCCGACCACCGGAACCACCGGGGACACCGAATTCATCCGTTCTAGCTGCAACACAACACTCTACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTCCAACAGAATCCCGGCCAACTCGCTCGCATCGCCATCGCCGTAAGCTTCTCCAAAGTCCACCGCACCGCCTCCTACCTCTCCAACCTCACTCGCGTCGCCGATTACGGTGGAAACTCCCGCGCCGCTCTTGCTCTCCATGACTGCTTCTCCAACCTCAACGACGCGGTGGATGAAATCCGCGGCTCGATTAAACAGATGCGCCAGATAGGAGCCGCCGGCAATTCCGCCGGCGCCGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGCGCGGCGCTTACCGATGAAGAAACGTGTACCGATGGATTTCAAGATGTGGAGAATTGTCCGATGAAAACGGACGTTAACGATCGTGTGACGAAGGTGAAGAAGTTCACCAGCAATGCTTTGGCGTTGGTTAACGGTTACGCCAGTAAAGGAATGCCGTGA 648 0.5355 MRTQRPHQLFLFSIIFFASTFSYLQSVTATGEQPPTTGTTGDTEFIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYGGNSRAALALHDCFSNLNDAVDEIRGSIKQMRQIGAAGNSAGADSFLFQMSNVQTWMSAALTDEETCTDGFQDVENCPMKTDVNDRVTKVKKFTSNALALVNGYASKGMP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06668 215 Pfam Plant invertase/pectin methylesterase inhibitor 45 205 IPR006501 GO:0004857
Vivi5g06668 215 CDD PMEI-like_3 48 211 - -
Vivi5g06668 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 207 IPR035513 -
Vivi5g06668 215 FunFam Pectin methylesterase inhibitor 1 41 209 - -
Vivi5g06668 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 205 - -
Vivi5g06668 215 SMART PMEI_2 41 205 IPR006501 GO:0004857
Vivi5g06668 215 NCBIfam pectinesterase inhibitor domain 12 209 IPR006501 GO:0004857
Vivi5g06668 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06668 Vivi-Chr5 173857325 173858432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06668 8 208 Carbohydrate Esterase AT5G53370 24.880 4.04e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06668 - - cam:101503417 342.428