Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06606 ATGGTGGGGAAGAATGATTCAGCAAAGGGAAGGAATAGAGATTGGATTAGGGAACTTATGAATAGTAGCTCTGGTTATTGTGATGATCATCATGATCTTCGATCTAATGAGAACAATACTTTCTGTGTAGATTGTGCTGTTAGAATGTGTAGGCACTGTAAGGAAGCTCATTCCATGCATACAATGTTTCAGATTTACAGATATTCCTATCAGGATGTTTTTCGACATTCCGACTTGCACAACCTTTTCGACTGCTCAAATATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTAAAACCTCGGCCTCCAATCTATAAATCTAAACCTGGTGATCAATGCCCTGAATCTAAATCTAAATCAAAAGAAAGCAACTTATCAGCAAGATTTAAATTGGGAGGTACTACATGCGAACAATGCGGAAAACACTTGCAAGACGAGCGCAGTCGCTGGTGTTCAATTATATGCAAGATCTCAGCACTACCAGTGGAGCATCAAAGCCAAGGTCCTAATCATCACACAAAAAGGAGTTTAGTTTTCAACCAAAGTGGTAGATGCACCATCACTCCCAAAATTGAAGCAATTGACTTCACTATGAGTGATAACCTTAATTCGGAACCGGAGTCATCTATTTCTGAAGCTGAGCCATGTGGGCGGGTTGAAGTTGTGAATTTCAGGAAGCGCCCGAGAAAAACCCCTCCTCAAAGGCCTCACTTTGTTTTCATTTCTTAG 738 0.4024 MVGKNDSAKGRNRDWIRELMNSSSGYCDDHHDLRSNENNTFCVDCAVRMCRHCKEAHSMHTMFQIYRYSYQDVFRHSDLHNLFDCSNIQTYISNNERIVHLKPRPPIYKSKPGDQCPESKSKSKESNLSARFKLGGTTCEQCGKHLQDERSRWCSIICKISALPVEHQSQGPNHHTKRSLVFNQSGRCTITPKIEAIDFTMSDNLNSEPESSISEAEPCGRVEVVNFRKRPRKTPPQRPHFVFIS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06606 245 MobiDBLite consensus disorder prediction 103 127 - -
Vivi5g06606 245 Pfam PLATZ transcription factor 67 160 IPR006734 -
Vivi5g06606 245 SMART bboxneu5 22 65 IPR000315 GO:0008270
Vivi5g06606 245 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Vivi5g06606 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06606 Vivi-Chr5 173121681 173123861 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi5g06606 PLATZ 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06606 - - gmx:100815813 313.923