Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06605 ATGTTGTTCGAATCCAAGAAGAAGCTCTCAATTGAAATGAGAGTTAAAAAATCTAATCCGCAAGGTACTATTGATCCTGTAGGCGGTACTTTGCTAAAGCTTGGATCAGATGATGTTAATTGGTCTGAATCAAAGGGTCTATATTTACCAAATTGGACTTCGGCTGAAAACGGATTGTTTCCGTCTTATGAACCACAAGATGATGATCCAAAGTCTGATGAACCACAGGATGATGATCCAAAGTCTGATGAACAGCAGTCAGAGGGGTCTAAGATCATATGTCTAGTTGATTTTGATAAGAAATCTTGGGAAGTTAAACATATTGTTGAGAAGAGCAAGGACGTCTTTAATCTTGGATCTGATTGGGGAAAATTCCTTATTGATTTCATTTGCCTTTTTCTGTTCGTATTTCTGTTCCTTGATATTAATGAGTTTCATGTTTTAAGTTCAAGAGTGTTTCCGTCTTATGAACCACAGGATGATGATCCAAAGTCTGATGAACCACAGGAGGATGATCCAAAGTATGATGAACCACAGGATGATGATCCAAAGTCTGATGAACCACAGTTCAAGGTAAAAGAGTACCCTGATAAAACTGAAACTTTTGAAAGAGAGGGAGAAGATAATGATCCAAAGTCTGATGAACCACATGAGGATGATCCAATGTATGATGAACCACAGGCAGAGGGGTCTAAGATCATACATCTAGTTGATTTTGATAAGAAATCTAGAGAAGTTAAATATGTGGTTCAGAAGAGCAAGGACATCTTTAAGCTTGGATCTGGTTGGGGAAAATTCGTTAACGACAACAATTTGACTCAGGGCGATACGTCAGAGGGGTCTAAGATCATACGTATAGTTGATTTTGATAAGAAATCTAGAGAAGTTAAACATATGGTTCAGAAGAGCAAAGACATCTTTAAGCTTGGATCTGGTTGGGGAAAATCCGTTAACGACAACAAATTGACTCAGGGCGATACGATAGAATTTCTGTTACACCCGAATATTTTGTTCGAATCCAAGAATAAGCTCTCTATTGAAATGAGAGTTACAAAACCTAATCCGCAAGGTACTATTGATCCGGTAGGTGTTACTTTGCTAATGCTTGGATCAGATGATGTTAATTGGTCTGAATCAAAGGGTCAATATTTACCGAATTGGACTTCGGCTGAAAATGGAGTGTTTCCGTCTTACGAACCACATGATGATAATCTAAAGTTTGATGAACCACAAGATGATGATCCAAAGTTTGATGAACCACAGTCAGAGGGGTCTAAGATCATACGTCTAGTTGATTTTGATAAGAAATCTAGAGAAGTTTAA 1323 0.3779 MLFESKKKLSIEMRVKKSNPQGTIDPVGGTLLKLGSDDVNWSESKGLYLPNWTSAENGLFPSYEPQDDDPKSDEPQDDDPKSDEQQSEGSKIICLVDFDKKSWEVKHIVEKSKDVFNLGSDWGKFLIDFICLFLFVFLFLDINEFHVLSSRVFPSYEPQDDDPKSDEPQEDDPKYDEPQDDDPKSDEPQFKVKEYPDKTETFEREGEDNDPKSDEPHEDDPMYDEPQAEGSKIIHLVDFDKKSREVKYVVQKSKDIFKLGSGWGKFVNDNNLTQGDTSEGSKIIRIVDFDKKSREVKHMVQKSKDIFKLGSGWGKSVNDNKLTQGDTIEFLLHPNILFESKNKLSIEMRVTKPNPQGTIDPVGVTLLMLGSDDVNWSESKGQYLPNWTSAENGVFPSYEPHDDNLKFDEPQDDDPKFDEPQSEGSKIIRLVDFDKKSREV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06605 440 MobiDBLite consensus disorder prediction 57 88 - -
Vivi5g06605 440 SUPERFAMILY DNA-binding pseudobarrel domain 281 336 IPR015300 -
Vivi5g06605 440 MobiDBLite consensus disorder prediction 178 226 - -
Vivi5g06605 440 CDD B3_DNA 229 277 IPR003340 GO:0003677
Vivi5g06605 440 MobiDBLite consensus disorder prediction 154 230 - -
Vivi5g06605 440 MobiDBLite consensus disorder prediction 401 425 - -
Vivi5g06605 440 Pfam B3 DNA binding domain 227 277 IPR003340 GO:0003677
Vivi5g06605 440 Gene3D - 211 278 IPR015300 -
Vivi5g06605 440 MobiDBLite consensus disorder prediction 398 425 - -
Vivi5g06605 440 SUPERFAMILY DNA-binding pseudobarrel domain 227 277 IPR015300 -
Vivi5g06605 440 Gene3D - 279 357 IPR015300 -
Vivi5g06605 440 MobiDBLite consensus disorder prediction 163 177 - -
Vivi5g06605 440 SUPERFAMILY DNA-binding pseudobarrel domain 87 129 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi5g06605 B3 1.6e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06605 - - vvo:131606050 835.099