Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06592 ATGCTTATCTTAGACGAAACGGCAATAAAGGAACTGCCTTCATCCTTGCACAATTTAGTTGGGCTTGAAGAATTGAGCTTACACAATTGCTCAATGCTCGAGGTTATTCCTTCTTGCATTGGAAGTCTCAACAAACTTTGTAAGTTAGACCTCACCTGCTGTGAATCTCTTGAAACTATTCCAAGCAGCATTTTCAAATTGAAGTTAACAAAATTTGATTTGTATGGCTGCTCAATGCTGAAGACCTTCCCAGAGATCTTGGAGCCTGCAGAAAATTTTGCTCACATTAGCTTAACAAAAACAGCAATTAAAGAACTTCCTTCATCGCTGGACTATTTGGTGGGGCTTCAAACCTTGCGCCTTAATTTGTGCAGAGATATTGAGCTTCTTCCAAACAACATCAGTAACATAAACCTTCTCTCTAAGCTTGATTTTTCAGGTTGTGACAAGCTATCAGAAATTCCAAGTGATATTGGTCGCTTGTCATCACTCCGAGAATTGTCATTTCATGAAAGTGGTATTGTTAGCCTTCCTGAGAGTCTTGTTCATCTTTCAAGCTTGAAATCACTTGATTTAACCGACTGTAAAAGACTTGAATGTATCCCAGAGCTACCACCATTTCTGGAGCACTTGTGGGCTTTTGATTGTCCATCCATTAGGAGAGTGTCAAGTTCAAGTACTACAATTTCATCACATTGCAAAGAGGGTCATCAACGTATCTTCAAATTTCATCTCACTAATAGTCAAGAGCTAGATTCAAGTGCTCAAAGTAACCTTGCGGCTGATGCACAGATGAGGATCCTTCAGGGTGCATATAGATCCGTGTTCTATTGCTTTCCAGGGAGTGCAGTTCCTTCTTGGTTCCCTTACCGTTGCGAAGGACATTCAGTGACTCTGAATACAGATTTGCTAAACTGGTGCAATGATAATAGGCTCATTGGGTTCGCTCTATGTGTCGTTTTGGGACTTGAAGATATGCATGATGAAGAAAGAAGAGATAGAGTTTTTAGCTATAGATTTGTAGTTGAATCTGATGATGGTATACACATATTTCCTAGCAATGATCAGCTGAGATACTATTTCAGGTGGAAGGGTGAACAGAGATTTATTGTCCCTGATCACACATTCCTCTGGAAATATCACTTGGATTCTTCAATTGTTAGTCAAATGCTCTCTCGTCGTGTTCACAAATTCACATTTGAGATATGCAGATATAATGATGGTTTATATAGGCTAACGAATGGAGCAGATTTCAAGGTAAGAAAGTGTGCAATATGTCCTCTTTATAAGAAAGAGAAAGATGATAATGATGTTGCTGGTAACTGTTCCAACAATATTCAATGA 1344 0.3899 MLILDETAIKELPSSLHNLVGLEELSLHNCSMLEVIPSCIGSLNKLCKLDLTCCESLETIPSSIFKLKLTKFDLYGCSMLKTFPEILEPAENFAHISLTKTAIKELPSSLDYLVGLQTLRLNLCRDIELLPNNISNINLLSKLDFSGCDKLSEIPSDIGRLSSLRELSFHESGIVSLPESLVHLSSLKSLDLTDCKRLECIPELPPFLEHLWAFDCPSIRRVSSSSTTISSHCKEGHQRIFKFHLTNSQELDSSAQSNLAADAQMRILQGAYRSVFYCFPGSAVPSWFPYRCEGHSVTLNTDLLNWCNDNRLIGFALCVVLGLEDMHDEERRDRVFSYRFVVESDDGIHIFPSNDQLRYYFRWKGEQRFIVPDHTFLWKYHLDSSIVSQMLSRRVHKFTFEICRYNDGLYRLTNGADFKVRKCAICPLYKKEKDDNDVAGNCSNNIQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06592 447 Gene3D Ribonuclease Inhibitor 2 259 IPR032675 -
Vivi5g06592 447 SUPERFAMILY RNI-like 2 230 - -
Vivi5g06592 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 68 167 - -
Vivi5g06592 447 Pfam C-JID domain 279 432 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06592 Vivi-Chr5 173048180 173050559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06592 16 197 WRKY Transcription Factor Family AT4G12020 35.165 1.27e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06592 - - vvo:131604016 890.567