Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06516 ATGGGTGGTGGAGGAACGATCGCCGATGGACTTCGTCGTTTGTTTCAACGACGATCTACAACTACTACTAAACGCCGCAATGATGATGATGATGCTGATCATGACAACCGCGTCTCCGTGAAAGATTTACGCTCACAGTTGGCAACCATTCCAACCACTAACGACGATCGTCACCATCACACTCCTCTTCCTCCAACTACTACTACTACTAAGTCGTCTCTCTTCAACATCAAAGTTCCTGTTCAACCTCTTTTCCCTCCTTCTTCCATGGATCCAAACAAAAAGGGTGGGCCGGAGACAGAGTTTTTTACTGAGTATGGTGAGGCAAGTCAATACCAGGTCCAAGAAATTATTGGAAAAGGAAGTTATGGTGTTGTCTGTTCTGCGATTGACATTCATACTGGTGAAAAGGTTGCAATCAAGAAAATTCATGATGTTTTCGAGCATGTATCAGATGCCACGCGGATCCTTAGAGAGATTAAGCTCTTGCGCTTGCTTAGACATCCTGATATTGTAGAAATTAGGCATATTATGCTTCCTCCTTCCCGAAGGGAGTTCAAGGATGTCTATGTTGTGTTTGAGTTGATGGAATCGGATCTACATCAAGTGATTAAGGCAAATGATGATCTTACGCTTGAGCACCATCAATTTTTCTTGTACCAGCTTCTTCGCGGCCTCAAATTTATACATACAGCAAATGTGTTTCACCGTGATTTGAAGCCAAAAAATATTCTTGCCAATGCTGATTGCAAACTGAAGATATGTGATTTTGGACTTGCCCGAGTCTCATTTAATGATGCCCCATCTGCTATTTTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTATTGGGAGACCATTGTTTCCTGGAAAAAATGTGGTGCACCAGTTGGATCTCATGACTGATTTGCTCGGTACTCCTCCTCCCGAGTCCATTGCAAGAATTCGAAATGAGAAAGCTAGAAGGTATCTTAGTAGTATGCGAAAAAAGCATCCTGTTCCACTCTCCCAGAAATTTCCAAATATAGATCCTTTGGCTCTTCGTATACTGGAACGCTTACTTGCATTTGATCCTAAAAACCGTCCATCAGCTGAAGAGGCTTTGTCTGATCCTTATTTCCATGGCTTATCAAACATCGATCGCGAACCATCCACTCACCCCATTTCAAAACTTGAGTTTGAATTCGAGAGAAGGAAGTTGACTAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATCTTAGTGGTGGAGATCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTGGAGGAACATTACGGCAATGGGAAAGTAAAAGGCGAACGAAGCTCACCATTGCAGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTCATACTTCCAAGAATGAAAATAATGAAAACAACGATGTGGAAATGCCGACTCAGACTGGACCAAATCTTCAGAGTCCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTGAAAAAAAGTAAAGATCCAGAGGAACCAATTATAGAGGTCAACGACGACGCAGCAGACGAATTGACGGATAACCTGGCTGCCCTGCATGCTTAA 1746 0.4278 MGGGGTIADGLRRLFQRRSTTTTKRRNDDDDADHDNRVSVKDLRSQLATIPTTNDDRHHHTPLPPTTTTTKSSLFNIKVPVQPLFPPSSMDPNKKGGPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDIHTGEKVAIKKIHDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTLEHHQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLIGRPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKARRYLSSMRKKHPVPLSQKFPNIDPLALRILERLLAFDPKNRPSAEEALSDPYFHGLSNIDREPSTHPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLSGGDQTSFMYPSGVDRFKRQFAHLEEHYGNGKVKGERSSPLQRQHASLPRERVHTSKNENNENNDVEMPTQTGPNLQSPRSLLKSASISASKCIDVKKSKDPEEPIIEVNDDAADELTDNLAALHA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06516 581 ProSitePatterns Protein kinases ATP-binding region signature. 118 142 IPR017441 GO:0005524
Vivi5g06516 581 FunFam Mitogen-activated protein kinase 427 449 - -
Vivi5g06516 581 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 111 453 - -
Vivi5g06516 581 Pfam Protein kinase domain 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06516 581 Gene3D Transferase(Phosphotransferase) domain 1 198 426 - -
Vivi5g06516 581 ProSitePatterns EF-hand calcium-binding domain. 31 43 IPR018247 -
Vivi5g06516 581 MobiDBLite consensus disorder prediction 1 71 - -
Vivi5g06516 581 FunFam Mitogen-activated protein kinase 101 205 - -
Vivi5g06516 581 MobiDBLite consensus disorder prediction 517 537 - -
Vivi5g06516 581 ProSitePatterns MAP kinase signature. 147 250 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vivi5g06516 581 MobiDBLite consensus disorder prediction 502 516 - -
Vivi5g06516 581 MobiDBLite consensus disorder prediction 483 537 - -
Vivi5g06516 581 FunFam Mitogen-activated protein kinase 198 426 - -
Vivi5g06516 581 MobiDBLite consensus disorder prediction 21 41 - -
Vivi5g06516 581 SMART serkin_6 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06516 581 SUPERFAMILY Protein kinase-like (PK-like) 108 408 IPR011009 -
Vivi5g06516 581 CDD STKc_TDY_MAPK 111 448 - -
Vivi5g06516 581 Gene3D Phosphorylase Kinase; domain 1 127 449 - -
Vivi5g06516 581 ProSiteProfiles Protein kinase domain profile. 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06516 Vivi-Chr5 171955412 171960633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06516 1 580 MAP Kinase Gene Family AT1G73670 67.105 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi5g06516 Pkinase 1.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06516 - - gmx:100780831 887.486