Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06511 ATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATAATCAATCAGAAGATTCACAAGGTGAAAGGAGTAACAAGGTCAATGATGGTTCGTCTTCGTCGCCTACTACGCGAAAGAAGCTTTCGAATTGGTTGCAGTCAGTTTCTTCTAATAATAGGCAGAGTCCATGTAGTCCTCCATCTCCAAATTTGGCAAGAGGGGAGAGAGTGGAGCTATCGGATTCAGTGAGTTTTGGTGGTGGTTTGGATATGGTTTGTGAATCGGGGAAGCGTGATTCGGAGTCTAGCAGTTCAAGGGATCCTGAAGTGGAGGAGGAATATCAGATTCAGCTTGCTTTAGAACTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCCGAAGTTGTCGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGATGGTTTCTATGATCTATACGGTGTCTTAACCGACTCAACCTCGACAAGAATGCCTTCTCTTATAGATCTGCAAGGAACCCCAACCGGAAATGATGTAAAATGGGAAGCAGTCTTGGTCAATAGGGTTGCTGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCATGGAGCTTGCAGTGATAAAGTCAAGAGAAGATTTTGAAATAGTTATAGATAGAAATCTGGTGCACAAGCTTGCAATACTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTTAAGAGCATGGAGGAGTCTTAGTTTCAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCTCTTGGTTCGCTGACCATGGGACTGGCTCGGCATCGTGCATTGCTATTTAAGGTATTAGCCGATAGTTTGGGTATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCCGACGATGTGGCAATGAACTTTGTCAAGATTGATGAAGGAAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCCGATGCAGCTGGTTCGCATATTGAGTACGATGATTCTTCTTTCGTTGCCAGTCCTTCATCAAGAGATCATGATTCGTCTCGGATTGCATCGTTCAGCAGCGGTGTTGGAAGTTCGTCCGGAGAAACTTCGGAGTTTGGGACTTTTGAAAAAGGAAACAGGTACAAGCATTTTGCCTATGCAGGGAAGGAATCTGATACTGGCAAGGATGAAGTAAAGAAACCGTTAAATGAATTCAAAAATATGCCGAACGTAGAAAAGATCAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCGTACACGCACGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCTGCAGCACATAGAATGAAAGTCAAAGATGTTTCTCAATATATGATCGACGCTGCAAAAGAGAACCCTAACTTGGCTCAAAAGCTTCACGATGTTTTACTTGAAAGCGGTGTTGTTGCTCCTCCTAACTTGTTTTCTGAAATTTATCATGACCAGATAGGTTCTCAAAATGAGGCCAATCAAAACGAGGACAATTCTCCAACTGAAGAAGTAGATGAATATAAATATGGAAGTGCACAGAAAGAAGCCAAGGTTGGCGATAATCAAGCTACTCCTCGATTTTTGCCTCCATTGCCTCCACACAGAACTCATCCCAAAGCAAGTCCTAGCCATCTGACGGAGCATTCTAAGCCTGTAGAAGGTTTAGGAATCGGCCATTCTCTTGATACAAGGGAATCTGCTGGACAGCAGATACAATCCGATACAGAAGCAGCACAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGCGGCTGCGGCTGCTGTTGTCGCTTCGTCTATGGTAGCTGCCGTGGCAAAGTCAAGCACAGATTCAAATTTTGAAATTCCTGTAGCGGCAGCTGCTACTGCCACTGCTGCGGCTGTTGTAGCAACCACTGCTGCTGTCAATAATGTCAATAAACAGTATGAGCAGGGGAATCGAAGTGATGGAGAGACAGGTAGTGGTGATGGAGAGAATAATGCTTTAGGAGTAAACTCAGAAGGCGAGCGAAAATCTGATAGATCAGTAAGTAATGATAGCTCAAAATCTGATTCTGCACTAGAAGATGTTGCTGAGTATGATATTCCATGGGAGGAAATCTCGATGGGTGAGCGTATCGGACTTGGATCGTATGGAGAAGTGTATCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTACTTCAAGATATCTCTGGGGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATTATGAGAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGGCCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCGAGAGGGAGTTTGTATAGATTACTTCACCGACCTAACAGTCAATTAGACGAGCGAAGGCGATTGAGGATGGCCCTGGACGCTGCTCGAGGAATGAACTATTTGCACAACAGCACACCAGTGATAGTGCATCGGGATTTGAAATCCCCAAACCTTCTTGTCGACAAAAACTGGGTTGTAAAGGTATGTGATTTCGGCTTATCCCGAATGAAGTACAGTACATTCCTTTCTTCAAGATCAACGGCGGGAACAGCCGAGTGGATGGCTCCAGAAGTATTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTACGGAGTCATATTATGGGAGCTCTGTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAGCATCGTCGTCTCGACATTCCAGACAATGTGGACCCTGCTGTTGCAAGTATTATTAGACAGTGTTGGCAGACAGATCCAAAATTGAGACCTACGTTTGCTGAAATCATGGCGTTGCTGAAGCCGTTGCAAAAGCCAATTACTGCTTCTCAAGTGCATAGAGCAAATGCTCCGACACCATCATCGCGAGTTCCTGAAGATCCTGAAGCATAA 3054 0.4411 MKNILKKLHIMSNNQSEDSQGERSNKVNDGSSSSPTTRKKLSNWLQSVSSNNRQSPCSPPSPNLARGERVELSDSVSFGGGLDMVCESGKRDSESSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTDSTSTRMPSLIDLQGTPTGNDVKWEAVLVNRVADSNLLKLEQKAMELAVIKSREDFEIVIDRNLVHKLAILVAEYMGGSVEDPESMLRAWRSLSFSLKATLGSMVLPLGSLTMGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDAAGSHIEYDDSSFVASPSSRDHDSSRIASFSSGVGSSSGETSEFGTFEKGNRYKHFAYAGKESDTGKDEVKKPLNEFKNMPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHDQIGSQNEANQNEDNSPTEEVDEYKYGSAQKEAKVGDNQATPRFLPPLPPHRTHPKASPSHLTEHSKPVEGLGIGHSLDTRESAGQQIQSDTEAAQVKYGKNVPVAAAAAAAAAVVASSMVAAVAKSSTDSNFEIPVAAAATATAAAVVATTAAVNNVNKQYEQGNRSDGETGSGDGENNALGVNSEGERKSDRSVSNDSSKSDSALEDVAEYDIPWEEISMGERIGLGSYGEVYRGEWHGTEVAVKRFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLLHRPNSQLDERRRLRMALDAARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELCTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAVASIIRQCWQTDPKLRPTFAEIMALLKPLQKPITASQVHRANAPTPSSRVPEDPEA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 676 696 - -
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 87 104 - -
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 364 395 - -
Vivi5g06511 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
Vivi5g06511 1017 SMART serkin_6 735 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06511 1017 SUPERFAMILY Protein kinase-like (PK-like) 719 986 IPR011009 -
Vivi5g06511 1017 Pfam Protein tyrosine and serine/threonine kinase 736 986 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 PRINTS Tyrosine kinase catalytic domain signature 809 822 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 PRINTS Tyrosine kinase catalytic domain signature 895 905 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 PRINTS Tyrosine kinase catalytic domain signature 848 866 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 PRINTS Tyrosine kinase catalytic domain signature 958 980 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 PRINTS Tyrosine kinase catalytic domain signature 914 936 IPR001245 GO:0004672|GO:0006468
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 1 104 - -
Vivi5g06511 1017 Pfam Ethylene-responsive protein kinase Le-CTR1 144 348 - -
Vivi5g06511 1017 CDD STKc_MAP3K-like 741 987 - -
Vivi5g06511 1017 Gene3D Phosphorylase Kinase; domain 1 728 812 - -
Vivi5g06511 1017 Gene3D Transferase(Phosphotransferase) domain 1 814 999 - -
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 8 61 - -
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 545 604 - -
Vivi5g06511 1017 FunFam Serine/threonine-protein kinase CTR1 814 997 - -
Vivi5g06511 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 184 996 - -
Vivi5g06511 1017 ProSitePatterns Protein kinases ATP-binding region signature. 741 762 IPR017441 GO:0005524
Vivi5g06511 1017 ProSiteProfiles Protein kinase domain profile. 735 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 676 722 - -
Vivi5g06511 1017 FunFam Serine/threonine-protein kinase isoform 1 726 813 - -
Vivi5g06511 1017 MobiDBLite consensus disorder prediction 997 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06511 Vivi-Chr5 171905636 171912244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06511 1 1009 MAP Kinase Kinase Kinase AT1G73660 60.618 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi5g06511 PK_Tyr_Ser-Thr 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06511 - - gmx:100778331 1506.12