Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi5g06498 | ATGTGGATGGTAGGTTACAATGAAGGTAGTGACTTCAACATGGCTGATTATCCTTTCAATGGAAGAAAACTCAGACCTCTCATTCCAAAGCCACTCACTACTACTTCCTCTTCTACTTCTTCTCCTAACAACAACATTTCAACTACTAATCCTTCCTTAAACCGCATTCATGGCACCAATGATTTCTTCACACAATATCACAACCTTCACCAAGTTGGAGATCAAAGCAAGAGATCAGAGTTGAACAATCCGGCCGCAGTTGTGGTGAGTTCGAGATGGAATCCAACGCCGGAACAGTTAAGAGCACTTGAAGAATTATATAGAAGAGGAACAAGAACACCATCTGCTGAACAAATCCAACAAATCACTGCACAGCTAAGAAGATTCGGAAAAATTGAAGGAAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAACGACGCCGTCAAATGGAATCAGCAGCTGAGTTTGATGCTTCTCTTGAAAAGAAAGACCTAGGAGCAAGTAGGACAGTGTTTGAAGTTGAACACACCAAAAACTGGCTACCATCCACAAACTCCAGTACCAGTACTCTTCCTCTTGCAGAGGAATCTGCTTCAATTCAAAGGGTAGCAGCAAAAGCAGATCAGTACTCTAGAACAGATGGATGGGTCCAATTCGATGAAGCAGAAAGAAAAAATTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTTGTCCTACCTTCATAAACACTACACAATGTTACCCTAATAATTCTAATTACATCCCTTCTACAGCAACAGCTAGCATGGCCACCACCACCTCAACTACAGTAACAACTAGACTAATGGACCCAAAACTCATCAAGAGGACACATGATTTAAGCTTATTCATTTCACCTTTCCACTTAACCAGTAATAGTAGTAGAATCAACACTAGTACTCACACTCAGCATGAAGAATCTGATCAAACACTTCAACTTTTCCCAATAAGGAATGAAGGAGATAATGGAGGCAGTGATGATGTTGATCATAGCATTATTAACCAACACAAAGAGACAGAGATATCATCTTCAGCAATGAATGCACCAAACCAGTTTATTGAGTTTCTACCGTTGAAGAACTGA | 1131 | 0.4014 | MWMVGYNEGSDFNMADYPFNGRKLRPLIPKPLTTTSSSTSSPNNNISTTNPSLNRIHGTNDFFTQYHNLHQVGDQSKRSELNNPAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEFDASLEKKDLGASRTVFEVEHTKNWLPSTNSSTSTLPLAEESASIQRVAAKADQYSRTDGWVQFDEAERKNFMERNATWHMMQLTCPTFINTTQCYPNNSNYIPSTATASMATTTSTTVTTRLMDPKLIKRTHDLSLFISPFHLTSNSSRINTSTHTQHEESDQTLQLFPIRNEGDNGGSDDVDHSIINQHKETEISSSAMNAPNQFIEFLPLKN | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi5g06498 | 376 | Gene3D | - | 89 | 151 | - | - | |
Vivi5g06498 | 376 | PANTHER | WUSCHEL-RELATED HOMEOBOX 1-RELATED | 74 | 370 | IPR044555 | GO:0003700|GO:0099402 | |
Vivi5g06498 | 376 | SMART | HOX_1 | 88 | 155 | IPR001356 | GO:0003677 | |
Vivi5g06498 | 376 | MobiDBLite | consensus disorder prediction | 28 | 55 | - | - | |
Vivi5g06498 | 376 | SUPERFAMILY | Homeodomain-like | 91 | 157 | IPR009057 | - | |
Vivi5g06498 | 376 | Pfam | Homeodomain | 91 | 150 | IPR001356 | GO:0003677 | |
Vivi5g06498 | 376 | ProSiteProfiles | 'Homeobox' domain profile. | 96 | 151 | IPR001356 | GO:0003677 | |
Vivi5g06498 | 376 | MobiDBLite | consensus disorder prediction | 30 | 55 | - | - | |
Vivi5g06498 | 376 | CDD | homeodomain | 92 | 152 | IPR001356 | GO:0003677 | |
Vivi5g06498 | 376 | FunFam | WUSCHEL-related homeobox 4 | 90 | 157 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi5g06498 | Vivi-Chr5 | 171688932 | 171691577 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi5g06498 | 1 | 376 | Wox Gene Family | AT3G18010 | 37.317 | 1.61e-61 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-WOX | Vivi5g06498 | Homeodomain | 1e-19 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi5g06498 | - | - | vvo:131608217 | 718.383 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi5g06498 | 5 | 171688932 | 171691577 | Vivi5g06498 | 5 | 171688932 | 171691577 | ECH |