Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06465 ATGGCGAGGCTAGAGAGGGATGGCACAAACAAAAGTCTAGAGAGTTTAATGGACTCGCAGAAACCAAGAACCGCAACAAATGTTAACCAGCTGAGTTCCCAGAAGTCCATTCCTGGTTATGGACTCGAATTCACTAACCTCTCATACAGTATCATAAAGAAGCAGAAAAAGGATGGAGTTTGGATCAACAAAGAAACATTTCTTCTTCATGATATCTCTGGCCAGGCAGTTAAAGGTGAAATTTTGGCAATCATGGGGCCTAGTGGTGCTGGAAAATCTACCTTTCTCGATGCTTTGGCCGGGCGAATTGCTAAAGGAAGTCTAGAAGGATCGGTTAAAGTTGATGGAAAGCCGGTAACAACAAGCTACATGAAAAGGGTGTCATCCTATGTGATGCAAGATGACCAGCTCTTCCCTATGTTAACAGTTTTCGAAACATTTATGTTTGCTGCAGAAGTAAGGCTTCCTCCTTCTATTTCCAGGGACGAAAAAAAGAAAAGGGTGCATGAGCTTCTTGATAAACTAGGCTTACAGAGTGCTACACATACCTATATTGGTGATGAAGGAAGGAGAGGAGTGTCCGGAGGAGAACGTAGAAGGGTATCTATTGGCATAGAGATCATTCATAAGCCATCGCTTTTGTTTCTGGATGAACCTACCTCGGGTCTGGATTCTACAAGTGCTTACAGTGTAGTTGAAAAGATTAAAGACATTGCTCATGGAGGAAGTATTGTCTTAATGACCATACATCAGCCTTCATTTAGAATTCAAATGCTCCTCGACAAGATCACTGTCCTCGCAAGGGGAAGATTGATATACATGGGAAGGCCCGATGCACTTCCGACTCACCTGTCTGGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAACTGAATATGATCAGGCAACTGTTGGACTTGACCCTCTTGTCCAATACCAAAATGATGGCCATAAGCCTGACCTAGCAGCCATGACCCCTGTTCCGAAACCTCCACATTACAGAAGGAACACCCCAGCATCTAAACACATGATTAGCCTGCGCAGCCAAGGATTTACTGCTGGCACACCACAACCTGAATCATCACAGTTCGGTCTTGATGATGAGGACGACGATGATGACGAGAATTTTGATAACTCCCTGGAAAGGAGAAGTGTTAAAACATCAAGGAACATAACGACCAGTGGTGTTTATCCACGTTTAGCTTCTCAGTTCTACCAAGATTTCTCAGCCAAAGATTTCTCTGTCTGGATTTACAATGGCGTAGTAGGAACCCCGCGTCGCCCACCATCATGGACTCCAGCTAGAACTCCGGGATGGACACCTGGGAAAACACCCTTATCAGGACCAAGAAGTTTTGTTTCCAACCAACATTCTGTATCTTATCAGGAACCTTATTATCACCAAAAAGCGCAGACAGATGTTAGCCAGTCTATGGAGTATTCTGCAACATCATATGCACCTTCATATGAAGAGTTTGAGATTGAGGAAGTGCTTGATGAGCCGGACCTTGGACCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACGCTACTCAATGTAATTCGAACTCCAGAACTCTTTGCCTCCCGTGAGATCGTGCTGACTGTTATGGCACTTGTCTTATCCACCATTTTCAATAACCTGGGTGATACTACTTTCAAAGACATCAACAGGCTTCTCAATTTCTACATCTTTGCAGTATGCCTTGTTTTCTTTTCTTCCAATGATGCAGTACCATCTTTTATCAATGAAAGGTTCATATTCATCAGGGAAACATCCCACAATGCTTACCGTGCTTCTTCATATGTAATGTCTTCCCTCATTGTTTACCTTCCATTTTTTGCTGCTCAAGGCCTCACATTTGCTGTCATAACCAAATTAATGCTCCACTTGAAAAGCAGTCTCTTCAATTTCTGGATGATACTTTTTGCCTCCCTCATTACTACCAATGCGTATGTAATGCTTGTTAGCGCACTTGTGCCTAGTTACATCACAGGTTATGCAGTAGTCATTGCGACAACAGCGCTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCGGATACTGGTCGTGGCTCCACTATATTTCTGCAATCAAATACCCATTTGAGGGATTGCTGATAAATGAATTCAAGAACGATCGTGGCTGCTATACAGGAAACAAAGCAGATTTATCCCCAGGACCATTAGGAGACGTGAAGCTCAGTAGAAGCCATAATGCCAGTCTTCCCCTGAACTGCTTATTAGGAGAAGATGTTTTGTCCACAATGGATATTACAATGGAAAACCTATGGTATGACATCTTAATCCTACTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTACTTGGTTTTGAGATTCTACTCCAAAAATGAAAGAAAATGA 2445 0.4307 MARLERDGTNKSLESLMDSQKPRTATNVNQLSSQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETFLLHDISGQAVKGEILAIMGPSGAGKSTFLDALAGRIAKGSLEGSVKVDGKPVTTSYMKRVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLDKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAHGGSIVLMTIHQPSFRIQMLLDKITVLARGRLIYMGRPDALPTHLSGFGRPVPDGENSIEYLLDVITEYDQATVGLDPLVQYQNDGHKPDLAAMTPVPKPPHYRRNTPASKHMISLRSQGFTAGTPQPESSQFGLDDEDDDDDENFDNSLERRSVKTSRNITTSGVYPRLASQFYQDFSAKDFSVWIYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQHSVSYQEPYYHQKAQTDVSQSMEYSATSYAPSYEEFEIEEVLDEPDLGPKYANPWLREVAVLSWRTLLNVIRTPELFASREIVLTVMALVLSTIFNNLGDTTFKDINRLLNFYIFAVCLVFFSSNDAVPSFINERFIFIRETSHNAYRASSYVMSSLIVYLPFFAAQGLTFAVITKLMLHLKSSLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPGYWSWLHYISAIKYPFEGLLINEFKNDRGCYTGNKADLSPGPLGDVKLSRSHNASLPLNCLLGEDVLSTMDITMENLWYDILILLAWGVLYRFFFYLVLRFYSKNERK 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06465 814 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Vivi5g06465 814 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Vivi5g06465 814 MobiDBLite consensus disorder prediction 13 32 - -
Vivi5g06465 814 Pfam ABC-2 type transporter 524 730 IPR013525 GO:0016020|GO:0140359
Vivi5g06465 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 283 IPR027417 -
Vivi5g06465 814 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 801 - -
Vivi5g06465 814 Gene3D - 42 286 IPR027417 -
Vivi5g06465 814 MobiDBLite consensus disorder prediction 1 32 - -
Vivi5g06465 814 MobiDBLite consensus disorder prediction 359 392 - -
Vivi5g06465 814 MobiDBLite consensus disorder prediction 326 346 - -
Vivi5g06465 814 MobiDBLite consensus disorder prediction 436 455 - -
Vivi5g06465 814 CDD ABCG_EPDR 42 275 - -
Vivi5g06465 814 FunFam ABC transporter G family member 6 57 284 - -
Vivi5g06465 814 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Vivi5g06465 814 SMART AAA_5 78 278 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06465 Vivi-Chr5 171316199 171319682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06465 79 359 Calmodulin-binding Proteins AT2G36910 23.592 4.16e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06465 K05681 - gmx:100819497 1291.17