Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06458 ATGGCTTCTCCACCTCATCATCACTCTATGAATAATAAAACATGGACGCAAACAATTCTCCTGTCTTTTCAAATTGTTGGAGTTGTTTATGGTCAACTAAGCACTGCTCCCTTATATGTTTTTACTACAATGCGTTCTGAAGATCTTGATTCCGAGGAAGTTGTTTATGAACTCTTCTCCTTCATTTTTTGGACTCTCACTACTATTTCTTTCATCAAATATGTCCTCATAGTCCTCAAAGCTGATGATAATCGAGAGGGTGGTACTTTTGCTTTATACTCACTCCTGTGTAGAAATGCAAAGGTTGGTTTACTCCCTTGTGATAGAACTGCCGATGAGGTCATGCTTTTGGAGGACACATCAACTCCTCCTTCTAAGATCAATTTTGACTCCAGAGCTAGAAGGGCCATTGAGAAACATAAGTTCTGTCACTATTTGATTTTGTTCTTGGCCCTTTTTGGTTCCTGTATGACTATTGGAGCCGCCGTCCTTACTCCAGCACTATCTGTCTTATCAGCTTCATTTGGAGTTGAGAGATCCTTATCTGAGTTATCACACCTATTTACCTCGTCACAACATACCCAGGATTCCGTCTCAAATGCTCTACAAAAATATGTACCTGTTCCCGCTGCGTGTGTCATATTGATAGGCCTGTTCGTGCTGCAGCCCTGTGGTACACATAAAATTGGATTCATGTTTGCTCCGATTATTGTTGTTTGGCTTTTGTTTGTTGGTGCGGTGGGAGTTTATAATATTGTCCGCTGGGACGTAGAAATTCTCTATAAAATATCCCCACTATACCTGTTCAAATTCATTAGGAATCTTGATGTCAGCAGATGGAGGCTATTAGGGAGCACCATTTTATGCGCGGCAGGATCAGAGGCAATGTTTGCAGGGTTGGGCCATTTTTCCAAGAAATCAATCAAGATTACATTTATTTGCTTGATCTATCCGCTTCTTGTGATATGCTATGCCGGCCAGGCTGCGTTTATCTCTAAAAATTTGCACATTAAAGATTTTAATCATCTTAGTCAATCTGTGCCAAGTCATTCCAAACATATATTCATAGTAGTATCCTTACTAGCTTCAGCTGTCGGAAGCCAAGCAACTATAACAGCATGCTTCTCTATCATTAACCAGTGTCTGGCACTAAATTGCTTTCCTAGAGTGAAAGTCATTCACACATCAAAAACTATACACGGCCAAGTTTATATCCCTGATGTCAACTGGTTATTGATGATTTTCAGTCTGGCTGTCACAATTGGTTTCAGAGACATGGTGAAGATCGGCAACGCAACAAGTTTGGCTATAATATCTGGAATGCTGGTGACAACTAGTCTCATGTCACTAGTCATCGCTTTGTATTGGGAGAAGAATTTGTTGATATCTGCATACTTTCTACTATGTTTTGGCATTGTCGAGGTTGCATATCTTTCAGCCTGTATGCTGCAATTTCACAGGGGAGCTTGGTATCTAGTTGTCCTTTTGATAGTGTCGATGACAGTCATGCTTTCATGGCATTATGGAACGGTGAAGAAGTATGAGTTTGATTTACAAAACAAGGTATCAACCGAATGGCTAATAGATGTTAGTCCAGGTCTTGGGATTTCAAGGGTAGCTGGAATTGGCTTCATATACACAGACATAGTAACTGGGATCCCAGCTTTCTTTTCCCATTTTATTACTAATCTTCCTGCATTTCATCAAGTGTTGATCATGGTGTCATTCAAGTCTATGCCGGTGCCTCATGTTCCAGAAAGTGAAAGGTATCTCATAGGAAGGATTGGACCAAGAGATTATAAAATATATCGTTGCATTGTGAGATATGGTTATTGTGATAACATCAGGGACACGAATGATTTTGAGGAGAAGATCATTCGCGCTATTGGAGAATTCATTTCCATCGAACATGTTACTGACATTGAATCAATGGTTTCGCCAGATGAAAGAATGATTATAGTAGGAAATTCATCCGATGGAAATGCATTAGTCCCTCTGATGAATGAATCAAGCAACCAAGTGAGTATTATCAATGAAGCTCAGGTAAGTCCAATAGCAATGGAAGATAGTGATCATACGGTTTTGGCGAGTAGTAGTAAGTCTTGCAAGAAAAGAAAGAAAGTGAGGTTCATGTTGCCACCTGCTAGTAGTGTTCCTAAAATGGATGAATCAGTTAAGAAGGAGCTTTTGGAACTGATTGATGCAAGGGAGAGTGGAAGTGCTTATTTCTTAGGACAGTCGCATTTAGTGGTGCGTGGTGGATCAAACTATCTAAAGATATTCTTAATAATGGTTTATCGTTTCTTTGAAAAAAATGGGAGGGAACCACCAGTTGCTCTAAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGTATGATATGTACTATATGA 2391 0.3977 MASPPHHHSMNNKTWTQTILLSFQIVGVVYGQLSTAPLYVFTTMRSEDLDSEEVVYELFSFIFWTLTTISFIKYVLIVLKADDNREGGTFALYSLLCRNAKVGLLPCDRTADEVMLLEDTSTPPSKINFDSRARRAIEKHKFCHYLILFLALFGSCMTIGAAVLTPALSVLSASFGVERSLSELSHLFTSSQHTQDSVSNALQKYVPVPAACVILIGLFVLQPCGTHKIGFMFAPIIVVWLLFVGAVGVYNIVRWDVEILYKISPLYLFKFIRNLDVSRWRLLGSTILCAAGSEAMFAGLGHFSKKSIKITFICLIYPLLVICYAGQAAFISKNLHIKDFNHLSQSVPSHSKHIFIVVSLLASAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQVYIPDVNWLLMIFSLAVTIGFRDMVKIGNATSLAIISGMLVTTSLMSLVIALYWEKNLLISAYFLLCFGIVEVAYLSACMLQFHRGAWYLVVLLIVSMTVMLSWHYGTVKKYEFDLQNKVSTEWLIDVSPGLGISRVAGIGFIYTDIVTGIPAFFSHFITNLPAFHQVLIMVSFKSMPVPHVPESERYLIGRIGPRDYKIYRCIVRYGYCDNIRDTNDFEEKIIRAIGEFISIEHVTDIESMVSPDERMIIVGNSSDGNALVPLMNESSNQVSIINEAQVSPIAMEDSDHTVLASSSKSCKKRKKVRFMLPPASSVPKMDESVKKELLELIDARESGSAYFLGQSHLVVRGGSNYLKIFLIMVYRFFEKNGREPPVALKIPHAALVEVGMICTI 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06458 796 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi5g06458 796 Pfam K+ potassium transporter 23 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi5g06458 796 NCBIfam potassium uptake protein 21 796 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06458 Vivi-Chr5 171244018 171247701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06458 7 796 Inorganic Solute Cotransporters AT1G70300 45.285 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06458 K03549 K12236 gmx:100801073 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06458 5 171244018 171247701 Vivi5g06458 5 171244018 171247701 ECH