Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06449 ATGGCACAAGACACAAACTCAGTTGATGTCATTTTAGACTTTCTCAGGAGAAATCAATTCACTTCTGTTGAAGCAGCATTACGAACTGACCTCAATAATCATAATAATCACAAAAAGGAAGTGAAATCAAGTCAGATTATTAAAACACCTATACAACAACATCACAAGGAAGTGGAAGACTTTCCACCACTTCAACTCCCTTTGCCTCCTCCTCCTCTTCCTATTCAACTACAATTTCAATCTTCAGGTATGAAGGGGGCTGCAGTGGGCAGTTGGTTATCCATAAGTCAGGGGATATCAGAGGATACGTCCGATCTTATATCAGGTTTTGCAACAGTTGGTGATGGGTTGAATGAATTTGTTGACCATCCTAACGAGTACTGGGACTCTGATGAATATAATGATGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGACGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGCTCATGGAAGTGTTCTAGATCCTCGGGAAAGATGTCCGGCCAAAGACGAGGACGATGATCAATCTTTGGTTGAGGAGGATTCTTACTTCTCTGGGGAGCAATATCTTCAGACAAATAATGTTGAACCAGTCACAGCTTCTGATGATCCTATTGGCCTAAGAATTACTGAAATGTATGGAAGGACTAATGGTAATTATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTAAACCTGATGTGTGCAGAACCTATCTGGAAAGGCTTTGTCCCTCCAACAAATGAGCTCATCATGCTAGGAGAAGGGAATATATTGAATGATAGCTTAAGGTCACAATTAGAGGATATTTATATGGACGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTGGGGGTCAAAAGTGATGCTGTAGATATTGGTAGGGAAGTTCGTGAAGATTTGGCTGGTGGTAGTAGTGAAGGGGGTTTAGAATATTTTCATGATCATGATGTTAGGCTTGGTGGTTTTAGACACTCTAATCATGATTTGGATAAGAGAAAGAAAAAGGGAAATGACAAGAGCGTGTCAAATAAATATGTCATAGGGGGTGATAAAGATGCACAGTTCCAGGTGAAAACACAAAGTGAACAGAAATTTGTATTTCCTCTATCTTTGAAGGATGGCCAGATGATTCAGCCTACCTCCGACAAGGCCCTGGGGTCAAATAACTGCATTGCAGATGAAACTGATAACTATCTTAATGCATTTTTGGAATCTGATGACACTCTTCCTTCGTGGAGGCGGAAGAGTACGGATTCTTTACCCGTTAAAAGTTCCAGGGATGCAAATAATGCCAATGCAATAAGATCAACAAACTCTTCTCCAACATCAGTCTCAAATTATGGATATTCTAAAAGAGATCGTGTCAAGCTAGAAGAGGATGAAAAAGTTGGAGTTGTAAGGGAAGATGGTCTAGGAACTCTAGAGGATGAAGAGGCAGCTGCTGTGCAGGAGCAAGTAAGGAAAATAAATGCCCAGGAGGAGGAATTTGAAACCTTTGATTTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCACGCTGCTTTAAATTCGATAATAGCCGGAAGGTATCATGTCACAGAGCATCTGGGATCTGCTGCTTTTAGCAAAGCTATACAGGCTCATGACATGTATACTGGCATGGATGTTTGTGTTAAAATTATAAAGAATAACAAAGACTTCTTTGATCAAAGTCTTGATGAGATCAAGCTTCTCAAGTACATCAATAAGCACGACCCAGCTGACAAGTATCACCTTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGGGGTGAAGTTTACTTTACGATGCCGAGATTGCAGTCAATCACCATTCAGTGTTTGGAAGCACTTCAATTTTTGCATAGCCTTGGACTGGTACATTGTGACTTGAAGCCAGAGAATATATTGGTTAAAAGTTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTCCTCATATGTTCAGTCAAGGTCCTATCGTGCTCCTGAAGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCAGAGCTTTGTACTGGCAATGTTCTCTTCCAAAGCGATTCACCGGCAACACTACTTGCTCGTGTGATCGGGATAATTGATCCAATAGATCAAAGTATGCTTGCAAAAGGATGTGATACATACAAGTACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAATAGGTTAGAATACTTGATTCCGAAAAAGACATCGCTGAGACATAGATTACCTATGGGAGACGAAGGGTTTGTTGAGTTTGTTGCTCATTTGCTTGAGATCAACCCAAAGAAGAGGCCGTCTGCTTCCGAGGCTCTGAAGCACCCTTGGTTGTCTTACCCTTACGAACCTATATCATCTTGA 2583 0.4011 MAQDTNSVDVILDFLRRNQFTSVEAALRTDLNNHNNHKKEVKSSQIIKTPIQQHHKEVEDFPPLQLPLPPPPLPIQLQFQSSGMKGAAVGSWLSISQGISEDTSDLISGFATVGDGLNEFVDHPNEYWDSDEYNDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTAHGSVLDPRERCPAKDEDDDQSLVEEDSYFSGEQYLQTNNVEPVTASDDPIGLRITEMYGRTNGNYLMAQYDGQLMDEEELNLMCAEPIWKGFVPPTNELIMLGEGNILNDSLRSQLEDIYMDDDQHGSVRSIGVGVKSDAVDIGREVREDLAGGSSEGGLEYFHDHDVRLGGFRHSNHDLDKRKKKGNDKSVSNKYVIGGDKDAQFQVKTQSEQKFVFPLSLKDGQMIQPTSDKALGSNNCIADETDNYLNAFLESDDTLPSWRRKSTDSLPVKSSRDANNANAIRSTNSSPTSVSNYGYSKRDRVKLEEDEKVGVVREDGLGTLEDEEAAAVQEQVRKINAQEEEFETFDLKIVHRKNRTGFEEDKNFHAALNSIIAGRYHVTEHLGSAAFSKAIQAHDMYTGMDVCVKIIKNNKDFFDQSLDEIKLLKYINKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLVHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLSSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQSDSPATLLARVIGIIDPIDQSMLAKGCDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDEGFVEFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06449 860 Gene3D Transferase(Phosphotransferase) domain 1 603 851 - -
Vivi5g06449 860 MobiDBLite consensus disorder prediction 162 188 - -
Vivi5g06449 860 SMART serkin_6 549 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06449 860 ProSiteProfiles Protein kinase domain profile. 549 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06449 860 Coils Coil 493 513 - -
Vivi5g06449 860 Gene3D Phosphorylase Kinase; domain 1 543 630 - -
Vivi5g06449 860 SUPERFAMILY Protein kinase-like (PK-like) 541 853 IPR011009 -
Vivi5g06449 860 MobiDBLite consensus disorder prediction 433 468 - -
Vivi5g06449 860 MobiDBLite consensus disorder prediction 432 470 - -
Vivi5g06449 860 Pfam Protein kinase domain 549 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g06449 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Vivi5g06449 860 CDD PKc_DYRK_like 549 851 - -
Vivi5g06449 860 PANTHER DUAL SPECIFICITY PROTEIN KINASE 100 851 - -
Vivi5g06449 860 FunFam Serine/threonine-protein kinase ppk15 628 852 - -
Vivi5g06449 860 FunFam Putative serine/threonine-protein kinase dyrk2 543 630 - -
Vivi5g06449 860 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06449 Vivi-Chr5 171164640 171169586 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06449 546 846 MAP Kinase Gene Family AT5G19010 28.972 8.65e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Vivi5g06449 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06449 - - psat:127107989 1560.04