Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06431 ATGGGGTGGTGCAGCGAGGTTATCACACTGTCACTCGCTCCTCCTCCTGTAGGTTTATTCAGCAATAATAATAAAAGTGCGGTGTTTCAATTTCAAAAGCCTTTGTTAAAATTCAAATTCAACAACTCCACTCTTGTTATTCATCGGAACCCGCCGTTGGCTGCTCAACTACAACAACCGTCGTCGTCGTCAAGTTCAAGGGATTTTGTTGTGGTTAATTTCTACCATTTTGTGTTCATCAAAAACCCACAGCAACAAGTCGCCAAACACCTCTCTTTCTTGGAATTGGAGGGTCTAGACATCAATGGAAGAGTTTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGACGCTATGGCGTATGTCAACTGGATAAAAGAGGATAGCAGGTTTTCCGACATCCTCGTTCAGATATCTCCATCACAAACTGGACACACCTTTCCATCATTGAAGTTGCGCTATAAGCCTTCATTAGTACAGTTTAAAGGTGGCATATCAGATCTTTCATTGCTCGATCCTTCAATGCGGGCATTACCTTTATCACCTTCAGAATGGAGAAAGAGATTAGAAGTCATCAATAAAAATGATCCGCATTCAAAAGATTATACCAACAGAAATAACATTATATTGGATGTGAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGGCCTAACGTGGACTGTTTTAGGAGCACTTCATTTGGATTGTCTCAAGAGATCACTGCTTCAGACCCTTTGTCAAATGTAGATAAAGAAAATGCAAACATATTGATGTATTGCACAGGAGGGATTCGGTGTGATGTGTATTCTACAATACTGAGGCAGCATGGATTTCAGAATTTGTATACTCTGAAGGGAGGTGTTTCTCACTATATAAAGAATGAAGGTGCTGCAGAATGGATAGGAAATTTATTTGTATTTGACTCCCGACTGTCTCTCCCTCCTCCTGTTTACTATCCTCAGGCCATTCCTGAAGGTAGGATGACTCCAGTTTCTAGAGATGATAAGTTCGCCAAATGCTACATATGTAATGTAGAAGTCAGTGAACTGAGACATCGGAATTGTGCAAATCTTGACTGTAACTTGCTTTTTCTATGCTGCAGAAAATGCGTTAAGGATCTAAGAGGATGTTGTTGTTTGACTTGTACTACTGCCCCTAGGCTTAGACCCGCTTTAATTGGAGAGCAGAGATACAGAAAATGGCACATTTATCGTGACATGGATTTGCAAGGCAAGGGGAATTGA 1275 0.4094 MGWCSEVITLSLAPPPVGLFSNNNKSAVFQFQKPLLKFKFNNSTLVIHRNPPLAAQLQQPSSSSSSRDFVVVNFYHFVFIKNPQQQVAKHLSFLELEGLDINGRVYLNEQGINAQYSGPSKDAMAYVNWIKEDSRFSDILVQISPSQTGHTFPSLKLRYKPSLVQFKGGISDLSLLDPSMRALPLSPSEWRKRLEVINKNDPHSKDYTNRNNIILDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEITASDPLSNVDKENANILMYCTGGIRCDVYSTILRQHGFQNLYTLKGGVSHYIKNEGAAEWIGNLFVFDSRLSLPPPVYYPQAIPEGRMTPVSRDDKFAKCYICNVEVSELRHRNCANLDCNLLFLCCRKCVKDLRGCCCLTCTTAPRLRPALIGEQRYRKWHIYRDMDLQGKGN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06431 424 Pfam Rhodanase C-terminal 312 393 IPR022111 -
Vivi5g06431 424 Gene3D - 177 329 IPR036873 -
Vivi5g06431 424 ProSiteProfiles Rhodanese domain profile. 208 310 IPR001763 -
Vivi5g06431 424 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 207 322 IPR036873 -
Vivi5g06431 424 Gene3D - 57 164 - -
Vivi5g06431 424 Pfam UPF0176 acylphosphatase like domain 70 161 IPR040503 -
Vivi5g06431 424 Pfam Rhodanese-like domain 209 302 IPR001763 -
Vivi5g06431 424 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 62 415 IPR020936 -
Vivi5g06431 424 CDD RHOD_YceA 185 303 - -
Vivi5g06431 424 SMART rhod_4 186 307 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06431 Vivi-Chr5 171080003 171099796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06431 68 420 Sulfurtransferasese or Rhodanese AT1G17850 64.835 7.75e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06431 - - mtr:25488455 656.751