Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06393 ATGAATTCCCCATCTGATATAAAGATTAAAATACCCAAAGAATTGGATAGTCCTGATGACTGTTTCAATGGAATTGAAAGAAATGGTCATTTAGGATTATCCGCTCACGGCGAGGTCGAAGCTAAACATCGATTGGTTTTGGTTCAATGGTTAAATAGTTTTCTTCCTTCGTTGGACTTCTCGACGAATGTCACGGATGGTGAGTTAAGAGCTTGCTTAAGCAATGGTACAGTTTTGTGCCAGATACTTAACAAACTACGACCCGGTTCCGTGACTATGGTTAGCGAGTCCGATCATTCGCTGCCATCACAATCCGAAAACGTTAAAACCTTTCTGAAAGCCTTGGATGGATTAGGGTTGCCGCGGTTTGAAATATCAGACCTAGAGAAGGGATCGATGAAGCCTGTTGTGGATTGTCTTTTAATACTCCGAATCAAAAGCTTGATGAATTCTTTGGGAGATAATGTTTCTTCGACTAGTTCCACTGCCTCGAGCCCTCGTGGATATGCGGCTTCAAGTTTCCATTATTCCCCACCATTTAGTGTGGATCAGCGGAAGGCTTTGGCTGATTCAAGGTTTCATCGTGTTATGAGTAGCCCTGTTATGGCGGAACCGTCGGCTTCATTGATATACCAAGTCGGTAATAAGTTCCATGAGGTGTTTCAAATTAAACCTAGAAGCTACGCGGATCTTCCCGCTGCAAAAATATCCGAAATGATGAAATCAAACAGTTTAGATAATGCTCCCACTCAGTCGCTGCTAAGTGTAGTCAATGGTATTCTTGAAGAAAGCGTCGAAAAAAGAAATGGAGAAATACCTCATCGGGTGGCGTGCTTGTTGAGAAAGGTTTCACAGGAGATTGAGCGGCGCATATCAACTCAAGCGGAACATTTACGAACTCAAAGTAATCTTTTTAAGGCCCGGGAAGAAAAGTATCAGTCGAGAATAAGAGTGCTCGAGGCAATCGCATCTGGAAATAAAGAAGAGAGTGAGAGAGAACTTTCGTCACAGCTATTCGCTAGCCAGCTTCAACAGTTGAAGGTTGAGAAGGTCAAAGAGGAAGAAAAGAAAGAATGTGAAAAAAAAATTATTAGGTTGATGAAAATGCTAGAGGACAAAAATTTGGTAATTTTAGAATTGACACAAAAACTGGAAGAAACCAAAAACCAATACGAAACGCAATGCTCGCAGTTGGAAGAAGAAGCCGGTGATGCTAAAGAAGAGTTGAGACAGAAATCTCATGAATATGAGCATCAATCAGAAGAGTTGAGGAACGAGGTTAAAGAACTCGAGACTTCTTCGGATTCAAAATATCAGGAGTGGAACATGAAAAAGAACCAATTGCAGGCTGTTATAAATCTTCAATTTAGTTCCCTACAGAAATTGAAATTGTCTTGGGAATCGATTAGGCAAGATGTTATGAAAGAGCAAGCGGTTTATGCAGAAGAGTGTAATCAATTCGGTGTAAATCTCAAACCGCTCATACATGCATCTCAGAACTATCAAGTCATCCTTGCGGAAAATAAAAAATTATTTAATGAAGTTCAAGAACTAAAAGGAAACATCAGAGTATTTTGTCGAATTAGACCATTCCATGTAGGCAAAAAGGAAACACAGACAATTATAGAAGACATAGGTGAAAATGATTTGGTTGTGGAAAATCCCACCAAAGGGAAAGATGCGCTTCGATCATTTAAATTCAACAAGATATTCAGTCCTTCCGCGACTCAAGGGGATGTATACTCTGACATTCAACCTTTTGTAAGATCGGTACTAGATGGATATAATGTCTGTATGTTCGCTTACGGCCAAACTGGTTCGGGGAAAACTTACACAATGACTGGTCCAAGCGGAGCAACAAACGAAAATCTTGGTGTTAATTATCGAGCACTAAACGATCTCTTCAGAATTTCCACAAGTAGAGCAGGCTTCACAGACTATGAGATTTGGGTTCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTATCAACCGACGATTCTCAAAAAAGACTTGGGATATTGACTCAATCTCAATCCAACGGTATAGCAGTACCAGATGCCAGCATGTTTCCTGTTAAGTCACCTTCAGATGTCATTAAGTTGATGGACATTGGACTTAAAAATCGGGCTATTGGCGCGACCGCTATGAATGAAAGAAGTAGTCGTTCTCATAGTGTGGTCTCGATTCATGTTCGCGGGAAGGATTTCAAGTCAGGTTCTACTCAGTATGGCAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGAGTAGATCGTTCTGAAGTAACCGGCGATAGGCTTAGGGAAGCACAACATATAAACAAATCACTTTCTGCCCTCGGAGATGTCATTTTCGCCCTTTCTCAAAAGAGCTCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTGCAAAATTCTCTTGGTGGTCATGCAAAGACTCTGATGTTTGTCCAAATTAACTCGGACGCGAATTCATATTCTGAAACAATGAGTACTTTAAAGTTTGCGGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCACGGAATAACAAGGACGCGAGAGAATTATTGGAACAGGTGACTTCTATGAAGAGCATTATTTCGAAAAAAGACGAGGAGATCGAGCGTCTCAAGTCGCTAAACCCGCCGGTTGGTGGTATTTCTAAGCAAATTCAAAAACAACCAAGTGGAAGTTATAAGCATCTTGTTGAAGGTGATATCCAACATCGAATGTTCGATCATATACAGCAAAATGAACTTCACCATCCACCTGAAAACACTAGGCGAAAAACTCAAGGATTTTCAGAGACAGGTTTTAATGAAAAATCAAGTGATAGCTCTGACCATAATAGTCATGCTTTGGGCAACGAAACCGATGGTTCTTCTGATAACAACTCCATTATCAGCCGCGATAGCAAAAAAACTTCAGATAAGATGAAGAAGTCTAAAGTATTAACCAAAACCGTCAATGCGGTAAGGAAATTAGGCCGAATTCCCTCTAGCACGGGTATAGAAAAGGACACCTTGAAGAAAGGACCAGGTCTCACAAAAAGCCCGAGTATTAGCCACATTAAAGCTACAAAAAGGTGGCAGTAA 3111 0.4069 MNSPSDIKIKIPKELDSPDDCFNGIERNGHLGLSAHGEVEAKHRLVLVQWLNSFLPSLDFSTNVTDGELRACLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLILRIKSLMNSLGDNVSSTSSTASSPRGYAASSFHYSPPFSVDQRKALADSRFHRVMSSPVMAEPSASLIYQVGNKFHEVFQIKPRSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVEKRNGEIPHRVACLLRKVSQEIERRISTQAEHLRTQSNLFKAREEKYQSRIRVLEAIASGNKEESERELSSQLFASQLQQLKVEKVKEEEKKECEKKIIRLMKMLEDKNLVILELTQKLEETKNQYETQCSQLEEEAGDAKEELRQKSHEYEHQSEELRNEVKELETSSDSKYQEWNMKKNQLQAVINLQFSSLQKLKLSWESIRQDVMKEQAVYAEECNQFGVNLKPLIHASQNYQVILAENKKLFNEVQELKGNIRVFCRIRPFHVGKKETQTIIEDIGENDLVVENPTKGKDALRSFKFNKIFSPSATQGDVYSDIQPFVRSVLDGYNVCMFAYGQTGSGKTYTMTGPSGATNENLGVNYRALNDLFRISTSRAGFTDYEIWVQMVEIYNEQVRDLLSTDDSQKRLGILTQSQSNGIAVPDASMFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKDFKSGSTQYGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQNSLGGHAKTLMFVQINSDANSYSETMSTLKFAERVSSVELGAARNNKDARELLEQVTSMKSIISKKDEEIERLKSLNPPVGGISKQIQKQPSGSYKHLVEGDIQHRMFDHIQQNELHHPPENTRRKTQGFSETGFNEKSSDSSDHNSHALGNETDGSSDNNSIISRDSKKTSDKMKKSKVLTKTVNAVRKLGRIPSSTGIEKDTLKKGPGLTKSPSISHIKATKRWQ 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06393 1036 Gene3D Kinesin motor domain 462 849 IPR036961 -
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 1004 1036 - -
Vivi5g06393 1036 Coils Coil 343 363 - -
Vivi5g06393 1036 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 463 849 - -
Vivi5g06393 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 883 IPR027417 -
Vivi5g06393 1036 SMART kinesin_4 519 855 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 885 904 - -
Vivi5g06393 1036 Gene3D - 33 148 IPR036872 -
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 923 990 - -
Vivi5g06393 1036 Pfam Kinesin motor domain 527 847 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 SMART ch_5 43 143 IPR001715 GO:0005515
Vivi5g06393 1036 Coils Coil 501 521 - -
Vivi5g06393 1036 Coils Coil 370 440 - -
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 399 431 - -
Vivi5g06393 1036 PANTHER KINESIN-LIKE PROTEIN KLP-3 373 976 IPR027640 GO:0003777|GO:0007018
Vivi5g06393 1036 Gene3D - 357 399 - -
Vivi5g06393 1036 PRINTS Kinesin heavy chain signature 594 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 PRINTS Kinesin heavy chain signature 748 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 PRINTS Kinesin heavy chain signature 717 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 PRINTS Kinesin heavy chain signature 797 818 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 954 974 - -
Vivi5g06393 1036 ProSiteProfiles Kinesin motor domain profile. 521 847 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06393 1036 ProSiteProfiles Calponin homology (CH) domain profile. 41 148 IPR001715 GO:0005515
Vivi5g06393 1036 SUPERFAMILY Calponin-homology domain, CH-domain 41 147 IPR036872 -
Vivi5g06393 1036 MobiDBLite consensus disorder prediction 975 989 - -
Vivi5g06393 1036 Pfam Calponin homology (CH) domain 46 143 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06393 Vivi-Chr5 170509600 170516130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06393 257 847 Calmodulin-binding Proteins AT5G65930 31.877 2.66e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06393 K10406 - qsa:O6P43_008574 1082.4