Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06392 ATGAATTCCCCATCTGATATAAAGATTAAAATACCCAAAGAATTGGATAGTCCTGATGACTGTTTCAATGGAATTGAAAGAAATGGTCATTTAGGATTATCCGCTCACGGCGAGGTCGAAGCTAAACATCGATTGGTTTTGGTTCAATGGTTAAATAGTTTTCTTCCTTCGTTGGACTTCTCGACGAATGTCACGGATGGTGAGTTAAGAGCTTGCTTAAGCAATGGTACAGTTTTGTGCCAGATACTTAACAAACTACGACCCGGTTCCGTGACTATGGTTAGCGAGTCCGATCATTCGCTGCCATCACAATCCGAAAACGTTAAAACCTTTCTGAAAGCCTTGGATGGATTAGGGTTGCCGCGGTTTGAAATATCAGACCTAGAGAAGGGATCGATGAAGCCTGTTGTGGATTGTCTTTTAATACTCCGAATCAAAAGCTTGATGAATTCTTTGGGAGATAATGTTTCTTCGACTAGTTCCACTGCCTCGAGCCCTCGTGGATATGCGGCTTCAAGTTTCCATTATTCCCCACCATTTAGTGTGGATCAGCGGAAGGCTTTGGCTGATTCAAGGTTTCATCGTGTTATGAGTAGCCCTGTTATGGCGGAACCGTCGGCTTCATTGATATACCAAGTCGGTAATAAGTTCCATGAGGTGTTTCAAATTAAACCTAGAAGCTACGCGGATCTTCCCGCTGCAAAAATATCCGAAATGATGAAATCAAACAGTTTAGATAATGCTCCCACTCAGTCGCTGCTAAGTGTAGTCAATGGTATTCTTGAAGAAAGCGTCGAAAAAAGAAATGGAGAAATACCTCATCGGGTGGCGTGCTTGTTGAGAAAGGTTTCACAGGAGATTGAGCGGCGCATATCAACTCAAGCGGAACATTTACGAACTCAAAGTAATCTTTTTAAGGCCCGGGAAGAAAAGTATCAGTCGAGAATAAGAGTGCTCGAGGCAATCGCATCTGGAAATAAAGAAGAGAGTGAGCTATTCGCTAGCCAGCTTCAACAGTTGAAGGTTGAGAAGGTCAAAGAGGAAGAAAAGAAAGAATGTGAAAAAAAAATTATTAGGTTGATGAAAATGCTAGAGGACAAAAATTTGGTAATTTTAGAATTGACACAAAAACTGGAAGAAACCAAAAACCAATACGAAACGCAATGCTCGCAGTTGGAAGAAGAAGCCGGTGATGCTAAAGAAGAGTTGAGACAGAAATCTCATGAATATGAGCATCAATCAGAAGAGTTGAGGAACGAGGTTAAAGAACTCGAGACTTCTTCGGATTCAAAATATCAGGAGTGGAACATGAAAAAGAACCAATTGCAGGCTGTTATAAATCTTCAATTTAGTTCCCTACAGAAATTGAAATTGTCTTGGGAATCGATTAGGCAAGATGTTATGAAAGAGCAAGCGGTTTATGCAGAAGAGTGTAATCAATTCGGTGTAAATCTCAAACCGCTCATACATGCATCTCAGAACTATCAAGTCATCCTTGCGGAAAATAAAAAATTATTTAATGAAGTTCAAGAACTAAAAGGAAACATCAGAGTATTTTGTCGAATTAGACCATTCCATGTAGGCAAAAAGGAAACACAGACAATTATAGAAGACATAGGTGAAAATGATTTGGTTGTGGAAAATCCCACCAAAGGGAAAGATGCGCTTCGATCATTTAAATTCAACAAGATATTCAGTCCTTCCGCGACTCAAGGGGATGTATACTCTGACATTCAACCTTTTGTAAGATCGGTACTAGATGGATATAATGTCTGTATGTTCGCTTACGGCCAAACTGGTTCGGGGAAAACTTACACAATGACTGGTCCAAGCGGAGCAACAAACGAAAATCTTGGTGTTAATTATCGAGCACTAAACGATCTCTTCAGAATTTCCACAAGTAGAGCAGGCTTCACAGACTATGAGATTTGGGTTCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTATCAACCGACGATTCTCAAAAAAGACTTGGGATATTGACTCAATCTCAATCCAACGGTATAGCAGTACCAGATGCCAGCATGTTTCCTGTTAAGTCACCTTCAGATGTCATTAAGTTGATGGACATTGGACTTAAAAATCGGGCTATTGGCGCGACCGCTATGAATGAAAGAAGTAGTCGTTCTCATAGTGTGGTCTCGATTCATGTTCGCGGGAAGGATTTCAAGTCAGGTTCTACTCAGTATGGCAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGAGTAGATCGTTCTGAAGTAACCGGCGATAGGCTTAGGGAAGCACAACATATAAACAAATCACTTTCTGCCCTCGGAGATGTCATTTTCGCCCTTTCTCAAAAGAGCTCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTGCAAAATTCTCTTGGTGGTCATGCAAAGACTCTGATGTTTGTCCAAATTAACTCGGACGCGAATTCATATTCTGAAACAATGAGTACTTTAAAGTTTGCGGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCACGGAATAACAAGGACGCGAGAGAATTATTGGAACAGGTGACTTCTATGAAGAGCATTATTTCGAAAAAAGACGAGGAGATCGAGCGTCTCAAGTCGCTAAACCCGCCGGTTGGTGGTATTTCTAAGCAAATTCAAAAACAACCAAGTGGAAGTTATAAGCATCTTGTTGAAGGTGATATCCAACATCGAATGTTCGATCATATACAGCAAAATGAACTTCACCATCCACCTGAAAACACTAGGCGAAAAACTCAAGGATTTTCAGAGACAGGTTTTAATGAAAAATCAAGTGATAGCTCTGACCATAATAGTCATGCTTTGGGCAACGAAACCGATGGTTCTTCTGATAACAACTCCATTATCAGCCGCGATAGCAAAAAAACTTCAGATAAGATGAAGAAGTCTAAAGTATTAACCAAAACCGTCAATGCGGTAAGGAAATTAGGCCGAATTCCCTCTAGCACGGGTATAGAAAAGGACACCTTGAAGAAAGGACCAGGTCTCACAAAAAGCCCGAGTATTAGCCACATTAAAGCTACAAAAAGGTGGCAGTAA 3093 0.4067 MNSPSDIKIKIPKELDSPDDCFNGIERNGHLGLSAHGEVEAKHRLVLVQWLNSFLPSLDFSTNVTDGELRACLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLILRIKSLMNSLGDNVSSTSSTASSPRGYAASSFHYSPPFSVDQRKALADSRFHRVMSSPVMAEPSASLIYQVGNKFHEVFQIKPRSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVEKRNGEIPHRVACLLRKVSQEIERRISTQAEHLRTQSNLFKAREEKYQSRIRVLEAIASGNKEESELFASQLQQLKVEKVKEEEKKECEKKIIRLMKMLEDKNLVILELTQKLEETKNQYETQCSQLEEEAGDAKEELRQKSHEYEHQSEELRNEVKELETSSDSKYQEWNMKKNQLQAVINLQFSSLQKLKLSWESIRQDVMKEQAVYAEECNQFGVNLKPLIHASQNYQVILAENKKLFNEVQELKGNIRVFCRIRPFHVGKKETQTIIEDIGENDLVVENPTKGKDALRSFKFNKIFSPSATQGDVYSDIQPFVRSVLDGYNVCMFAYGQTGSGKTYTMTGPSGATNENLGVNYRALNDLFRISTSRAGFTDYEIWVQMVEIYNEQVRDLLSTDDSQKRLGILTQSQSNGIAVPDASMFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKDFKSGSTQYGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQNSLGGHAKTLMFVQINSDANSYSETMSTLKFAERVSSVELGAARNNKDARELLEQVTSMKSIISKKDEEIERLKSLNPPVGGISKQIQKQPSGSYKHLVEGDIQHRMFDHIQQNELHHPPENTRRKTQGFSETGFNEKSSDSSDHNSHALGNETDGSSDNNSIISRDSKKTSDKMKKSKVLTKTVNAVRKLGRIPSSTGIEKDTLKKGPGLTKSPSISHIKATKRWQ 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06392 1030 Coils Coil 495 515 - -
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 396 425 - -
Vivi5g06392 1030 Coils Coil 364 434 - -
Vivi5g06392 1030 Gene3D - 33 148 IPR036872 -
Vivi5g06392 1030 PANTHER KINESIN-LIKE PROTEIN KLP-3 365 970 IPR027640 GO:0003777|GO:0007018
Vivi5g06392 1030 Pfam Kinesin motor domain 521 841 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 948 968 - -
Vivi5g06392 1030 Coils Coil 1027 1030 - -
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 969 983 - -
Vivi5g06392 1030 Gene3D - 351 393 - -
Vivi5g06392 1030 SMART ch_5 43 143 IPR001715 GO:0005515
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 998 1030 - -
Vivi5g06392 1030 Gene3D Kinesin motor domain 454 843 IPR036961 -
Vivi5g06392 1030 ProSiteProfiles Kinesin motor domain profile. 515 841 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 457 843 - -
Vivi5g06392 1030 SMART kinesin_4 513 849 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 879 898 - -
Vivi5g06392 1030 ProSiteProfiles Calponin homology (CH) domain profile. 41 148 IPR001715 GO:0005515
Vivi5g06392 1030 Coils Coil 337 357 - -
Vivi5g06392 1030 MobiDBLite consensus disorder prediction 917 984 - -
Vivi5g06392 1030 SUPERFAMILY Calponin-homology domain, CH-domain 41 147 IPR036872 -
Vivi5g06392 1030 Pfam Calponin homology (CH) domain 46 143 IPR001715 GO:0005515
Vivi5g06392 1030 PRINTS Kinesin heavy chain signature 711 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 PRINTS Kinesin heavy chain signature 791 812 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 PRINTS Kinesin heavy chain signature 588 609 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 PRINTS Kinesin heavy chain signature 742 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g06392 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 877 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06392 Vivi-Chr5 170509574 170516130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06392 257 841 Calmodulin-binding Proteins AT5G65930 31.715 2.94e-71 257