Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06384 ATGGTACCATTATTCCTCATTTTCACACTCTCCTTCATTCTCATCGTCACCACAACCTTCTTCCTCCGTCCAAAACAGCCCAAACATGACAGGAAACGCCCACCCGGTCCATCGGGCTATCCTCTCATCGGTAACCTCCACATGTTAGGCACCCTCCCACACCGTTCCCTCGAAGCCTTATCCAAAAAACATGGCCCCATCATGTCACTCCGGTTAGGCCAAGTCCCAACAGTCATAGTGTCTTCCTCTTCAGCAGCCGAACAGTTCCTCAAAGCAAACGACCTTGCTTTCGCCAGCCGTCCTAAACTTGAAGCCACACACTACCTATCTTATGGTTCTAAAGGGTTAGTTTTCGCTGAATATGGCGCGTATTGGCGTAACATGAGGAAGATTTGTACTCTGCAGCTTTTGAGTGTTTCTAAAGTTGACTCGTTTGCCTCTTTGAGGAAGAGAGAAATGGAATTAGCTTTGAAGTTGTTGAAGAAAGCTGCGAGTTCGGGTGAGGTTGTTGATGTGAGTGAGTTTGTGCATGATGTTGTAATGGATATTGTGTGTAAAATGGTGCTGGGGTGTAGTATAGATGAGGTTTTTGATTTGAAGAGGTTGATTCAACAAGGGATGAACCTTTCTGGTGCTTTTAATCTTGCTGATTATGTTCCTTTTCTTCGAGTTTTTGATCTTCAGGGTATAAGAAAAAGGTACAAGAGAACTCATAAAGAGCTTGACCAAGTGTTGGAGAAGATAGTTAAAGAGCATGAAGAAAGTTCAGATGTACAAAATGGAGGACAGAAGCATAAGGACTTTATAGACATTCTACTGTCACGCATCGATCCATCTGGTGAACAGAACAATGGCGTTGATCGAACAAATATAAAGGCTATAGTCTTAGACATGATTGCTGGTGCATTCGAAACTTCTGCAACTGTCGTGGAGTGGGCTTTATCCGAGCTCATGAGACATCCAAGAGTAATGAAACATCTGCAACAAGAGTTAGATAATGTGGTTGGGGTGAACAAAATGGTGGAGGAAAAAGATTTGTCGAAGTTAAGTTACTTAGATATTGTGATCATGGAGACATTGAGATTATATCCCGCGGGACCACTCGTGCCACGCGTGTCAACTGAGGATGCTGTGGTTGATGGTTATTTTCTAGAAAAGAAATCAAGAATAATTGTGAATTTATGGGCAATAGGAAGAGATTCTAAGATATGGTCCGACAATGCTGAAGAGTTTTATCCAGAGAGATTCGTCGATAAAAATTTAGACTACCGTGGAAATGATTTCCAATTTATACCATTTGGTTTTGGTCGAAGAGGATGTCCCGGAATAAACTTGGGACTAATTACGGTTAAGCTTGTTGTCGCTCAACTAGTACATTGTTTTTCTTGGGAACTTCCATCGAATATGACTCCAAATGATTTGGACATGACAGAAAAATTTGGTCTGTCAATCCCAAGAGCCAAGCACTTGCTTGCCGTGCCAAACTATCGTCTTCACGGGGAAGCAACATGA 1512 0.4239 MVPLFLIFTLSFILIVTTTFFLRPKQPKHDRKRPPGPSGYPLIGNLHMLGTLPHRSLEALSKKHGPIMSLRLGQVPTVIVSSSSAAEQFLKANDLAFASRPKLEATHYLSYGSKGLVFAEYGAYWRNMRKICTLQLLSVSKVDSFASLRKREMELALKLLKKAASSGEVVDVSEFVHDVVMDIVCKMVLGCSIDEVFDLKRLIQQGMNLSGAFNLADYVPFLRVFDLQGIRKRYKRTHKELDQVLEKIVKEHEESSDVQNGGQKHKDFIDILLSRIDPSGEQNNGVDRTNIKAIVLDMIAGAFETSATVVEWALSELMRHPRVMKHLQQELDNVVGVNKMVEEKDLSKLSYLDIVIMETLRLYPAGPLVPRVSTEDAVVDGYFLEKKSRIIVNLWAIGRDSKIWSDNAEEFYPERFVDKNLDYRGNDFQFIPFGFGRRGCPGINLGLITVKLVVAQLVHCFSWELPSNMTPNDLDMTEKFGLSIPRAKHLLAVPNYRLHGEAT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06384 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 Pfam Cytochrome P450 34 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 FunFam Cytochrome P450 83B1 20 493 - -
Vivi5g06384 503 PANTHER CYTOCHROME P450 93A3-LIKE 10 499 - -
Vivi5g06384 503 Coils Coil 324 344 - -
Vivi5g06384 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vivi5g06384 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06384 503 Coils Coil 227 251 - -
Vivi5g06384 503 CDD CYP71-like 63 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06384 Vivi-Chr5 170387699 170389632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06384 1 498 Cytochrome P450 AT5G07990 39.608 2.49e-125 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06384 - - gmx:100814172 651.358