Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06367 ATGAAACATGGTCCAAAAAAGGAACTTCTTCAAACGTGCTTTGATAAGGACAAAAAGAACACATCTTCAAAAAACAGGATGACTGAAGGAAAGTCATCCGGTAAGGTTATTAAGAAACAAGACACAAAAAAGGTTTCTAGTCTTAGTCGCCAGTCTTCAAAAAAACAACCTCGGAAGGGTGAGAACCCCATTCGACTCATACCTCCTCCTGGCCAGGATTCTGATTTAGGACATCCGAGCACTTGGATCTGTAAAAATGCTGCTTGTAGGGCAGTTCTATCAATGGATGACACTTTTTGTAGGCGATGTTCTTGTTGTATCTGTCATCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTAGTATGCACATCTGAATCTACTCTAGGGGACTCCTGTGGATTGTCTTGCCATATCGAATGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCACGGGCAACTGATGCAACTGGATGGTGGCTATTGCTGTGCGTCCTGTGGTAAAGTTACTGGGATACTTGGATGCTGGAAGAAACAGCTAAATATTGCAAAAGATGTCCGGCGTGTAGATGTACTCTGTTATAGGATATATTTGTGCTACAGACTTCTGAATGGAACTTCAAAATTCAAAGACCTGCATCTAATGGTTCAGGAGGCTAAGGCTAAACTGGAGACAGAAGTTGGTCCTCTTGACGGAGTTTCTGCCAAAATGGCACGAGGCATCGTCAGCAGACTCCCTATTGCCAGTGATGTGCAGAGTCTCTGCACTCTTGCTATTGAGAAAGCTGATAGCTGGCTGGCCACTGTTCCCAATTTAAATCCAGGTTCCAAAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAACTTCCTCTGTCAAAATCATTTTGATTGAAATGTCAAGTATATGTTCCGAGGACATTAAGGGGTACAAGCTCTGGTATTACAAAAGTCGGGATGAGCCACACACAAAGGATCCTGTTTCTGTGTTTCCCAAATCTCAGAGGAGGATTTTGATATCCGACCTTCAACCTTGCACGGAATATACTTTTAGAATTGTATCTTACACTGACATGGGTGACCTGGGTCATTCCGAGGCTAAATGCTTCACTAAGAGCATTGAGATAGTTCAACATAAAATCTCTAAGTTTGTTGCTTCGAATCATAAAAAACTGAACTCTCAAGCCGGGGGTGATTTTTCTGCAATCACAGGCCCCAGATTTAAGGTTCAAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTCAAGAACGTGGTTACTTTGAGGAGTGTTGCTCTGCTGATATGAAAAATTGCTGCGGACAAGGTGAAATGGACAAGCCTAAAATTTCAGAAACGTGGTTTCCTTCAGATTCGCGAGGCCTTGATTTAAATGTTGTTTCAGTCCCTGATTTGAATGAAGACCTAACACCTCCTTTTGAGTCTTCCAGGGATGAAGGTATTGGTTGCACTTTACTGCACGCTGTAGAGGCAGTTGATGATGCTGCTTCTCATGACCTACAGAAAAATGATTTAGCAAGATCACATAGGAGTTGCGACTCACAAACCTGGGCTCATGGCCCAAGAGAAGTCTCAGCTGTTGATTCTCGTGTATATGCTGGCAGGAAAAGGGCTGCGAGATCAAATGAAGAAGGACATGACTGCGACAGCACTTTAATAAATGGTTCTCCTTTACGTATGCCGGATGGTTCACGTTCCTTGGATGAAAACTTTGAGTATTGTGTGAAAGTAATCCGTTGGCTAGAGTGTGAGGGTCACATCAAACAGGAGTTTAGGTTAAAATTGCTAACATGGTTTAGTTTGAGATCAACAGAGCAGGAACGCAGGGTGGTAAATACCTACATTCAAACTCTGATGGACGATCCAAGTAGTTTGGCAGGGCAACTGGTTGACTCTTTCTCTGATATTGTATCCAACAAGAGGCCAAGAAATGGATTCAGTAGTAAAGCTGGGGCATCAAAATAA 2004 0.4276 MKHGPKKELLQTCFDKDKKNTSSKNRMTEGKSSGKVIKKQDTKKVSSLSRQSSKKQPRKGENPIRLIPPPGQDSDLGHPSTWICKNAACRAVLSMDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTLGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDVRRVDVLCYRIYLCYRLLNGTSKFKDLHLMVQEAKAKLETEVGPLDGVSAKMARGIVSRLPIASDVQSLCTLAIEKADSWLATVPNLNPGSKEGSLPAACKFVFEEVTTSSVKIILIEMSSICSEDIKGYKLWYYKSRDEPHTKDPVSVFPKSQRRILISDLQPCTEYTFRIVSYTDMGDLGHSEAKCFTKSIEIVQHKISKFVASNHKKLNSQAGGDFSAITGPRFKVQDLGKILRLAWAQERGYFEECCSADMKNCCGQGEMDKPKISETWFPSDSRGLDLNVVSVPDLNEDLTPPFESSRDEGIGCTLLHAVEAVDDAASHDLQKNDLARSHRSCDSQTWAHGPREVSAVDSRVYAGRKRAARSNEEGHDCDSTLINGSPLRMPDGSRSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLMDDPSSLAGQLVDSFSDIVSNKRPRNGFSSKAGASK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06367 667 MobiDBLite consensus disorder prediction 1 74 - -
Vivi5g06367 667 Pfam Fibronectin type III domain 289 369 IPR003961 GO:0005515
Vivi5g06367 667 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 662 IPR044514 GO:0010048|GO:0040029
Vivi5g06367 667 SUPERFAMILY Fibronectin type III 289 367 IPR036116 GO:0005515
Vivi5g06367 667 MobiDBLite consensus disorder prediction 1 45 - -
Vivi5g06367 667 CDD FN3 288 367 IPR003961 GO:0005515
Vivi5g06367 667 Gene3D Immunoglobulins 284 380 IPR013783 -
Vivi5g06367 667 ProSiteProfiles Fibronectin type-III domain profile. 283 382 IPR003961 GO:0005515
Vivi5g06367 667 Pfam PHD - plant homeodomain finger protein 84 202 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06367 Vivi-Chr5 170222349 170229052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06367 42 658 PHD Gene Family AT3G24440 47.771 8.98e-180 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06367 - - tpra:123915437 1173.3