Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06356 ATGAAGAAAACTCAAACAAAAACACTTCTTCTGGTTACAATCTTTCTATGTCTAACCTTAAACACACTCTCCCTCTCAACTCTCACAATCAATGACCAATCTCTTACCTTCGAAAACAACCGTCTCAGAAACGCTTACATTGCCTTACAAGCTTGGAAACAAGCCATTCTCTCTGATCCACAAAACTTCACAACCAACTGGGTTGGACCCAATGTATGCAGCTACACCGGTATCTACTGTGCTCCAGCACCAGACAACCCTAAAATCCGCACTGTCGCCGGTATTGATCTCAACGACGCCGACATTGCCGCGCATTTACCCGATGAGCTTGGCCTTTTACAAGATCTAGCACTTTTCCATACGAACTCTAACAGATTATGTGGCACAGTTCCTCACACGTTTGAGAAACTGAAACTTCTGTTTGAGTTGGATCTCAGTAATAACAGATTCGCTGGGAAGTTTCCGGAAGTTCTGTTGCGGATTCCAGGCCTTAAATATTTGGATTTAAGGTTTAATGAGTTTGAAGGCAATGTTCCTAGAGAGTTGTTTGATTTACAGATAGATGCACTGTTCATAAATGATAACAGATTCTCGAATGTGTTGCCGGATAATTTTGGTAACTTGCCGGCGTCTGTTGTTGTTCTGGCGAACAATAAGTTCCATGGCTGCATTCCTTCGAGTATAGGCAACATGTCGAATTTGAATGAGATTAGTTTCATGAACAATTTGTTTAAGTCTTGTTTGCCTGATGAGATTGGATTGTTGAAGAATCTAACTGTTTTTGATGTTAGTGTTAATCAGTTTGTGGGGACTTTGCCGGCGGCGATTGGAGGTGCTGTAAGTTTGGAGCAGCTGAATGTGGCGGATAATTTGTTGTGTGGTAAGATTCCGGCGAGTATTTGTATGTTGCCGAATCTTAAGAACTTTACGTTTTCGAATAATTTTTTCACTGGTGAGCCGCCGGCGTGTTTGAGTTTGCCGGCGTCGGATGATAAGAGGAATTGTTTGCCGGCGAGGCCGTTTCAGAAGTCTCCGGGAGAATGTGTGGCGTATTTGTCTAAGAAGGTGGATTGTAAGTCGTTTAAGTGTAAGGCCTTTGCTCCTTCTTTTAATTCACCGTCGCCGGGAGTGTCACCTACCTCTCCACCAGGAATGCCGGGTGTGGCACCTTCCTCCCCACCGTCGATAGTGTCACCAACCTCTCCACCACTGCCGGGAACCGCACATTCCCCTCCACCGTCAACAGTTTCGCCACCACTCCCAGGAGTGGCACATTCCCCTCCATCACCGACAGGAACAGTACCTTCTTCTCCGCCGGGACATTCGCACTCTTCTCCGCCGGGACATTCTCACTCTTCTCCACCGGGACATTCACCACCTCCATCAACATCTCCAACAACTCCAGTGGGGTCACCACCGTCACACACTCCATCACCGTCGTCTCCGCCACTAAATACACCACCAGCACATGCTCCTCATTATGACTCATCGCCGCCACAGGCTCACTCACCTCTACCGTCACCCCATCCTCCCCATGTCCATTCACCACCACCGGGATCAACACCTTCCTTTCCACCACCAACGCACTCTTCTCCGCCGGTACATTCACAACCTCCATCTACATCTCCAACACCTCCTCTAGAATCACCACCGTCTCCGCCACTAAATTTGCCACCACCTAGAGGTTCTCATAATGGCCAATCACCACCGTCTCCACCATTAAATTCACCACCACCTACAGGTTCTCATCATGGCCGATCACCACCGCATTCACCTCATCCTTCTCCTGTTCATTCCTCCTCACCACCACCACCACCACCACCTTCTCAATTTCCATTCCCTTCTATACATCCACCGTCACAGGCACCGCCACCATTTTGTAAAGACAATCCACCTCCACCTCCACCATCTTCATCTTCCACATCACCACCACGAGTATATGCATCTCCACCTCCACCAATTCAACATACATCTCCATCACCACCACCTCCTTCCCCTGTTCATCACAGTTCGCCACCTCCACCACCTACCCCTACATATGGAGGACCTTTGCCACCAATCGTCGGACTCCCATACGCGTCACCTCCACCACCTCCATACTATTAA 2106 0.4839 MKKTQTKTLLLVTIFLCLTLNTLSLSTLTINDQSLTFENNRLRNAYIALQAWKQAILSDPQNFTTNWVGPNVCSYTGIYCAPAPDNPKIRTVAGIDLNDADIAAHLPDELGLLQDLALFHTNSNRLCGTVPHTFEKLKLLFELDLSNNRFAGKFPEVLLRIPGLKYLDLRFNEFEGNVPRELFDLQIDALFINDNRFSNVLPDNFGNLPASVVVLANNKFHGCIPSSIGNMSNLNEISFMNNLFKSCLPDEIGLLKNLTVFDVSVNQFVGTLPAAIGGAVSLEQLNVADNLLCGKIPASICMLPNLKNFTFSNNFFTGEPPACLSLPASDDKRNCLPARPFQKSPGECVAYLSKKVDCKSFKCKAFAPSFNSPSPGVSPTSPPGMPGVAPSSPPSIVSPTSPPLPGTAHSPPPSTVSPPLPGVAHSPPSPTGTVPSSPPGHSHSSPPGHSHSSPPGHSPPPSTSPTTPVGSPPSHTPSPSSPPLNTPPAHAPHYDSSPPQAHSPLPSPHPPHVHSPPPGSTPSFPPPTHSSPPVHSQPPSTSPTPPLESPPSPPLNLPPPRGSHNGQSPPSPPLNSPPPTGSHHGRSPPHSPHPSPVHSSSPPPPPPPSQFPFPSIHPPSQAPPPFCKDNPPPPPPSSSSTSPPRVYASPPPPIQHTSPSPPPPSPVHHSSPPPPPTPTYGGPLPPIVGLPYASPPPPPYY 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06356 701 Gene3D Ribonuclease Inhibitor 42 212 IPR032675 -
Vivi5g06356 701 FunFam Leucine-rich repeat extensin-like protein 1 46 207 - -
Vivi5g06356 701 Pfam Leucine rich repeat N-terminal domain 48 80 IPR013210 -
Vivi5g06356 701 MobiDBLite consensus disorder prediction 375 435 - -
Vivi5g06356 701 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 320 - -
Vivi5g06356 701 MobiDBLite consensus disorder prediction 372 701 - -
Vivi5g06356 701 MobiDBLite consensus disorder prediction 436 451 - -
Vivi5g06356 701 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 497 - -
Vivi5g06356 701 MobiDBLite consensus disorder prediction 452 701 - -
Vivi5g06356 701 Gene3D Ribonuclease Inhibitor 213 336 IPR032675 -
Vivi5g06356 701 SUPERFAMILY L domain-like 46 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06356 Vivi-Chr5 170102001 170104654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06356 32 363 Leucine-rich Repeat extension Gene Families AT4G13340 71.471 1.27e-171 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06356 - - cam:101504763 589.726