Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06353 ATGACTACTGGTCTTAACAGCAACAACACTTCCTTGCTCAAAATTCCAACCATCAAGTATAACAAACTCTTCATCAATGGAGATTTTGTTGATTCCGTATCAGGAGCAACATTTGAGACAATAGACCCAAGAACAGGAGAGGTGATTGCAAGAATCAGTGAAGGAGCTAAAGAAGACGTTGACATTGCAGTTAAAGCAGCACGTGAGGCATTTGACTCAGGTCCATGGCCTCGAATGTCTGGTGTTGAAAGGGGAAAAATAATGATGAAATTTGCAGAACTAATTGATGAAAACACAGAAGAACTAGCAGCATTAGATGCAGTTGATGCTGGAAAGTTGTACTATATTGCAAAGGTTATAGAAATACCTTCATCAGCAGATACATTACGTTACTATGCAGGTGCTGCTGATAAAATCCATGGTGAGGTATTAAAATCTTCTGGCCAATTCCATGCTTACACATTAATGGAACCAATTGGAGTTGTGGGACATATCATTCCATGGAATGCTCCGACTTCAATTTTCTTCACCAAAGTTAGTCCTTCTTTAGCTGCTGGATGTACCATGGTCCTTAAACCTGCTGAACAAACACCTCTCTCAGCTTTGTTTTATGCTCATCTAGCTAAGCTAGCTGGAATCCCGAATGGAGTGTTGAATGTAGTACCTGGATTTGGTCCAACTGCTGGTGCTGCAATTAGCTCTCACATGGACATTGATGTGGTTAGCTTTACTGGTTCAGTTGAAGTAGGCCGTGAAATAATGCAAGCTGCAGCAAAGAGTAATTTAAAACATGTTTCACTAGAACTAGGAGGCAAGTCACCTCTCATTATTTTCGATGATGCTGACGTCGACAAAGCTGCTGAGCTTGCTCTTTTCGGTCTCCTAACTAACAAGGGAGAAGTTTGTGTCGCAAGTTCCCGTGTGTTTGTTCAAGAAGGGATATATGATCAAGTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGATCGTTGGGGATCCTTTTGATCCTAAAACTCAACAAGGACCTCAGGCTGATAGGAACCAATTTGAAAAAATTATTTCCTATATTGAGCATGGAAAGAAAGAAGGAGCAACACTCTTGACTGGAGGTAAAGCATTGGGCAGCCAGGGTTACTACATTGAACCTACAATTTTCTCCGATGTAAAGGAGGACATGCTAATAGCAAAGGATGAAATATTTGGCCCTGTGATGGCACTAATGAAGTTTAAGACTATTGAGGAAGCCATTAAGAGTGCTAACAATACCAGATATGGCCTAGCAGCAGGCATTGTGACCAAGAACTTGGATATTGCAAACACTGTGTCAAGGTCGATTCGTGCAGGCATTATTTGGATCAACTGTTATTTAGCCTTGGGTAGTGACATTCCTTTTGGAGGATATAAAATGAGTGGATTTGGAAGAGATTTGGGATTGGAAGCTCTTCACAAGTACTTGCAAGTTAAATCCGTTGTAACACCTATTTACAATTCCCCTTGGCTTTGA 1506 0.4097 MTTGLNSNNTSLLKIPTIKYNKLFINGDFVDSVSGATFETIDPRTGEVIARISEGAKEDVDIAVKAAREAFDSGPWPRMSGVERGKIMMKFAELIDENTEELAALDAVDAGKLYYIAKVIEIPSSADTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTSIFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFTGSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADVDKAAELALFGLLTNKGEVCVASSRVFVQEGIYDQVEKKLVEKAKAWIVGDPFDPKTQQGPQADRNQFEKIISYIEHGKKEGATLLTGGKALGSQGYYIEPTIFSDVKEDMLIAKDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYLALGSDIPFGGYKMSGFGRDLGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06353 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Vivi5g06353 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Vivi5g06353 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Vivi5g06353 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Vivi5g06353 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 491 - -
Vivi5g06353 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Vivi5g06353 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Vivi5g06353 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Vivi5g06353 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 289 - -
Vivi5g06353 501 SUPERFAMILY ALDH-like 13 497 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06353 Vivi-Chr5 170054970 170064555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06353 7 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.161 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06353 K12355 - gmx:100779993 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06353 5 170054970 170064555 Vivi4g00130 4 2279186 2285822 PCT