Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06347 ATGGAAAACCAAAACCGTCTGAAAATGCGAATCTCTCGCATGTTCCGATCCTCATTCGGTTCCTGCAAAACCCGACAACATGCATCTGATGTTATGGAAAAACCACTATTTGCACCCCCCAACAACCACATCCCCTCCAAAACTCTACTACCCTTTCACCCCATTTCCAAACCCAAACCCTCTCAAAAAACCATCGACGACATGTCGTTTACCCTCTCTCATTCTCTTCCTCGTCGCAAAATCTCTACTTGTTCATCATCACCATTTCTCTGCGGTGCAAATAGCAATAACAACAACAACAACCTTAAACTCGACAGAAAAACATGTCCACCACCGGTTTCACCAAACAACACTACATTCAACGATGAACACATCAACAACAACAACAACCTAGGTTTCTACGAAAAAACCAACGCATCATCAAAAACCGTCACTAACAAAACCAAAACGAAGAACAAGAAAAAGAGAACGAAGAAGAAGAAGAAACAAACACAAACCAAGAAGAAAAACAGAACCTTTCCATTCAATTCATGTGCAAAAGACACAAACTTTGATAGCTACTGGTGGTACAGCACCGACGAAGACGACGAAACCGACACACTCTTCTCATCAAAGTCTCTCTCATCCGACTCCTCCAAGTCCCGCCGCCGTAAAACCTCTCGCCGGAAACCCGACCGGAGTTCCGACATGGGTGTTCTTCCGTTGAACGGAAAAGTCAAAGACACGTTCGCGGTGGTGAAGCGTTCGAGTGATCCGTACAGTGACTTTAGAACTTCCATGGTGGAGATGATCGTTGAGAAGCAAATATTTTCACCTAGTGATTTGGAGAATCTGTTACAGTGCTTTCTGTCGCTGAATTCGTATCATCATCACAAGATCATTGTTGAAGTTTACACAGAGATTTGGGAAGCACTTTTCTCTGACTGGCTTTGA 933 0.4373 MENQNRLKMRISRMFRSSFGSCKTRQHASDVMEKPLFAPPNNHIPSKTLLPFHPISKPKPSQKTIDDMSFTLSHSLPRRKISTCSSSPFLCGANSNNNNNNLKLDRKTCPPPVSPNNTTFNDEHINNNNNLGFYEKTNASSKTVTNKTKTKNKKKRTKKKKKQTQTKKKNRTFPFNSCAKDTNFDSYWWYSTDEDDETDTLFSSKSLSSDSSKSRRRKTSRRKPDRSSDMGVLPLNGKVKDTFAVVKRSSDPYSDFRTSMVEMIVEKQIFSPSDLENLLQCFLSLNSYHHHKIIVEVYTEIWEALFSDWL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06347 310 MobiDBLite consensus disorder prediction 95 175 - -
Vivi5g06347 310 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 138 307 IPR038933 GO:0045892
Vivi5g06347 310 Coils Coil 147 167 - -
Vivi5g06347 310 NCBIfam uncharacterized plant-specific domain TIGR01568 243 306 IPR006458 -
Vivi5g06347 310 MobiDBLite consensus disorder prediction 95 146 - -
Vivi5g06347 310 Pfam Transcriptional repressor, ovate 249 306 IPR006458 -
Vivi5g06347 310 MobiDBLite consensus disorder prediction 199 231 - -
Vivi5g06347 310 ProSiteProfiles OVATE domain profile. 245 304 IPR006458 -
Vivi5g06347 310 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06347 Vivi-Chr5 169940667 169941869 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi5g06347 Ovate 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06347 - - vvo:131608192 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06347 5 169940667 169941869 Vivi5g06347 5 169940667 169941869 ECH