LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g06341	ATGTCATCATCATTCTCTATCTCTTCTTCACTACCATCACTTCAAAACCCTAACTTCGACCATGCTCCTCTCTTCAAATCCCTCAAATTACCCAATCTCCGTTTCAATTCTAGAATCTCTTCACCACCACGCTCTCGTCCCAACTTCCCCCAACTCTACAAAACCTCCACCACTCTCCGCCGTAGATTCCCATGCAATAAAGCCTTGAAAGATTCCGGTGATGGTAGTGGTGGTGGTGGCGGTGGAGATGGTGACCAGGAGGTTGAGAAGAAAAATGTGTCTTCCGGACTTTTTCCAGAGTGGTTGAATTTCACTAGTGATGATGCCAAAACGGTTTTTGCTGCTTTGGCGATTTCCCTTGCGTTTCGGACTTTCATTGCTGAGCCGAGGTTTATTCCTTCTTTGTCAATGTATCCTACTTATAATGTTGGAGATAGAATTGTTGCTGAAAAGGTTTCATACTATTTTAGAAAGCCGTGTGCAAATGATATTGTGATTTTCAAAAGTCCTCCAGTTCTTCAAGAAGTTGGATATACTGATGATGATGTTTTCATAAAACGTATTGTTGCAAAGGAAGGTGATATCGTAGAGGTTCGAAATGGACATGTTGTAGTTAATGGGATTGAGAGGGATGAGAAGTTTATAAAAGAAGCACCGAAGTATGAGATGAAACCCATACGTGTGCCAGAGAACTCCGTTTTTGTGATGGGAGACAACCGCAATAACAGCTACGACTCACATGTGTGGGGTCCCCTGCCGGCCAAGAATATCATAGGTAGATCAGTATTCCGATATTGGCCACCAAATAGAGTTGCCGTCACAGTTGCTAAGGGAGGGTGCCCTGTTGAAACAAAGCCAGAGACTACAAGTACTACTCTAGCATCTCAATGA	891	0.4332	MSSSFSISSSLPSLQNPNFDHAPLFKSLKLPNLRFNSRISSPPRSRPNFPQLYKTSTTLRRRFPCNKALKDSGDGSGGGGGGDGDQEVEKKNVSSGLFPEWLNFTSDDAKTVFAALAISLAFRTFIAEPRFIPSLSMYPTYNVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRIVAKEGDIVEVRNGHVVVNGIERDEKFIKEAPKYEMKPIRVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRVAVTVAKGGCPVETKPETTSTTLASQ	296

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vivi5g06341	296	ProSitePatterns	Signal peptidases I signature 3.	233	246	IPR019758	GO:0004252\|GO:0016020
Vivi5g06341	296	MobiDBLite	consensus disorder prediction	66	89	-	-
Vivi5g06341	296	NCBIfam	signal peptidase I	110	268	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
Vivi5g06341	296	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	184	196	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
Vivi5g06341	296	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	228	247	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
Vivi5g06341	296	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	125	141	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
Vivi5g06341	296	CDD	S26_SPase_I	128	260	IPR019533	GO:0004252\|GO:0006465
Vivi5g06341	296	FunFam	Peptidase/ serine-type peptidase	134	265	-	-
Vivi5g06341	296	SUPERFAMILY	LexA/Signal peptidase	123	272	IPR036286	-
Vivi5g06341	296	Gene3D	Umud Fragment, subunit A	122	278	-	-

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g06341	Vivi-Chr5	169873303	169876111	Dispersed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi5g06341	136	267	MADS-box Gene Family	AT1G29960	31.818	2.13e-12	61.2

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g06341	K03100		-	qsa:O6P43_004025	363.229

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi5g06341	5	169873303	169876111	Vivi5g06341	5	169873303	169876111	ECH

Showing 1 to 1 of 1 entries