Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06322 ATGAATAGAAGTGTTCATCTTCAAACCTCACCAGTGCAACAACAAATGATGGCTGGAAACCCTAACAACTGGTGGAACCCTCCTGCTCCTGATCATCTTCAACCTCCTTCCAATTACTTTCTTACTCCATATCCTTCTTCATCTTCTCTTCCTCTTCCTCTTCCTTCTTGGCATGAAAATCAACAACTTCCTGATAACTCATGGACTCAACTACTGATGAGCGGCGGCGTGGTGTATGAAGAAGATAAGGAACAAGTTATGCTAACTCAGCCTGCTCTAAGTGCTTCTTCTCTTGTTGATCATGTAAAACATGAAAGTTCAGTGAACAATTATGTCTATGGAAATGAAGAATTTCATGGAACAACAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCTTCCTCCAAATCCAGCATGTTGGATTTCTCTAACAGTGCAAGATCTCCTTCATCAGATCCATCTTCTGATCAGTGTAATAGTGGTGCAGCTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACCATCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGATAGAATTACAGCCCTTCATCAACTTGTTTCACCATTTGGAAAGACTGACACAGCATCTGTCTTATTAGAATCTATTGGTTACATAAGATTCCTTCATAGTCAAATTGAGGTAATATTTCTTTTCCTCTCTTCACTCACAATCACATTGTTAAAAGTACATTTCATTTTCTTTACTTTTTCCCCGTGGATCATGCAGGCTCTTAGTTTACCATACTTGGGAAATGGATCACCAAACATTATCAAGAACCAGCAACAACAATCTGTTCAAGGTGAGAAAAGTTGTTTCTTCCCTGAACATCCTGGTCAGCTGCTGAATGAGAATTGTTTGAAAAGAAAAGCTGTTAGTGAGGGTTGCGAAGAAGAAGAAAATAAGGATTTGAAGAGTAGAGGATTGTGTTTGGTTCCTGTTTCATGCACAGTGCAAGTTGGAAGTGAAAATGGAGCTGATTATTGGGCTCCTGCATTTGGTGCTGGATTTCAATAG 1062 0.4002 MNRSVHLQTSPVQQQMMAGNPNNWWNPPAPDHLQPPSNYFLTPYPSSSSLPLPLPSWHENQQLPDNSWTQLLMSGGVVYEEDKEQVMLTQPALSASSLVDHVKHESSVNNYVYGNEEFHGTTNSTWSQIVSVPSSSSSKSSMLDFSNSARSPSSDPSSDQCNSGAAGGALKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLHSQIEVIFLFLSSLTITLLKVHFIFFTFSPWIMQALSLPYLGNGSPNIIKNQQQQSVQGEKSCFFPEHPGQLLNENCLKRKAVSEGCEEEENKDLKSRGLCLVPVSCTVQVGSENGADYWAPAFGAGFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06322 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Vivi5g06322 353 MobiDBLite consensus disorder prediction 141 164 - -
Vivi5g06322 353 MobiDBLite consensus disorder prediction 141 172 - -
Vivi5g06322 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 235 IPR036638 GO:0046983
Vivi5g06322 353 CDD bHLH_AtbHLH_like 183 230 IPR045239 -
Vivi5g06322 353 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06322 Vivi-Chr5 169677441 169681457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06322 1 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 35.025 1.93e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06322 - - psat:127105731 525.783