Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06308 ATGGCTTCTTCAATTCGACCTACTCTTTCTCTCCTCAATCGCTCTCCTCGTCTCTCTTTCTCCCGTTTTTCAACCGTAGTTCCACAATCCAAGAGTTTTGGATTGAAAGCGTGTTGTAGAATGATGAGAAAAAATGGGAACTCCGTTAGAGTTATGGCATCTACACCTGTCACTGCTTCACCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGACTTGGATAGAACCATTAAATTCTATACTGAGTGTCTGGGAATGAAGCTCCTTAGGAAGCGTGATATACCGGAGGAGAAGTATACTAATGCTTTTCTTGGATATGGACCGGAGGACTCACACTTTGTTATTGAACTTACATACAATTACGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAGGGGGGCAAAATATCTAGAGAACCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTATTGAGGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGCCCTACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAATCGATCAATCGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGAACACGAGATAATCCAGAGAACAAGTATACCATAGCAATGCTGGGTTATGGTCCTGAAGATAAAACTACTGTTCTGGAGCTGACCTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCAATTAAACTAACCACTGGAAAGGTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGACCCTGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1011 0.4055 MASSIRPTLSLLNRSPRLSFSRFSTVVPQSKSFGLKACCRMMRKNGNSVRVMASTPVTASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDITKTVELIRAKGGKISREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPENKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLTTGKVTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06308 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 205 328 IPR029068 -
Vivi5g06308 336 CDD GlxI_Ni 75 196 - -
Vivi5g06308 336 FunFam Lactoylglutathione lyase 71 200 - -
Vivi5g06308 336 NCBIfam lactoylglutathione lyase 74 199 IPR004361 GO:0004462|GO:0046872
Vivi5g06308 336 ProSitePatterns Glyoxalase I signature 1. 77 98 IPR018146 GO:0004462|GO:0046872
Vivi5g06308 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 74 198 IPR037523 -
Vivi5g06308 336 Gene3D - 201 336 IPR029068 -
Vivi5g06308 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 73 203 IPR029068 -
Vivi5g06308 336 Gene3D - 48 199 IPR029068 -
Vivi5g06308 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 204 328 IPR037523 -
Vivi5g06308 336 PANTHER LACTOYLGLUTATHIONE LYASE 57 336 - -
Vivi5g06308 336 FunFam Lactoylglutathione lyase 201 336 - -
Vivi5g06308 336 ProSitePatterns Glyoxalase I signature 1. 207 228 IPR018146 GO:0004462|GO:0046872
Vivi5g06308 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 75 195 IPR004360 -
Vivi5g06308 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 207 322 IPR004360 -
Vivi5g06308 336 ProSitePatterns Glyoxalase I signature 2. 141 153 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06308 Vivi-Chr5 169550683 169555713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06308 207 325 Calmodulin-binding Proteins AT1G08110 27.586 2.03e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06308 K01759 - gmx:100775714 587.8