Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06307 ATGGCTTCTTCAATTCGACCTACTCTTTCTCTCCTCAATCGCTCTCCTCGTCTCTCTTTCTCCCGTTTTTCAACCGCAGTAGTTCCACAATCCAAGAGTTTTGGATTGAAAGCGTGTTGTAGAATGATGAGAAAAAATGGGAACTCCGTTAGAGTTATGGCATCTACACCTGTCACTGCTTCACCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGACTTGGATAGAACCATTAAATTCTATACTGAGTGTCTGGGAATGAAGCTCCTTAGGAAGCGTGATATACCGGAGGAGAAGTATACTAATGCTTTTCTTGGATATGGACCGGAGGACTCACACTTTGTTATTGAACTTACATACAATTACGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAGGGGGGCAAAATATCTAGAGAACCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTATTGAGGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGCCCTACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAATCGATCAATCGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGAACACGAGATAATCCAGAGAACAAGTATACCATAGCAATGCTGGGTTATGGTCCTGAAGATAAAACTACTGTTCTGGAGCTGACCTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCAATTAAACTAACCACTGGAAAGGTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGACCCTGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1014 0.4063 MASSIRPTLSLLNRSPRLSFSRFSTAVVPQSKSFGLKACCRMMRKNGNSVRVMASTPVTASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDITKTVELIRAKGGKISREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPENKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLTTGKVTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06307 337 ProSitePatterns Glyoxalase I signature 1. 208 229 IPR018146 GO:0004462|GO:0046872
Vivi5g06307 337 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 199 IPR037523 -
Vivi5g06307 337 Gene3D - 49 200 IPR029068 -
Vivi5g06307 337 PANTHER LACTOYLGLUTATHIONE LYASE 58 337 - -
Vivi5g06307 337 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 76 196 IPR004360 -
Vivi5g06307 337 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 208 323 IPR004360 -
Vivi5g06307 337 NCBIfam lactoylglutathione lyase 75 200 IPR004361 GO:0004462|GO:0046872
Vivi5g06307 337 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 205 329 IPR037523 -
Vivi5g06307 337 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Vivi5g06307 337 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 74 204 IPR029068 -
Vivi5g06307 337 ProSitePatterns Glyoxalase I signature 2. 142 154 IPR018146 GO:0004462|GO:0046872
Vivi5g06307 337 Gene3D - 202 337 IPR029068 -
Vivi5g06307 337 FunFam Lactoylglutathione lyase 202 337 - -
Vivi5g06307 337 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 206 329 IPR029068 -
Vivi5g06307 337 CDD GlxI_Ni 76 197 - -
Vivi5g06307 337 FunFam Lactoylglutathione lyase 72 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06307 Vivi-Chr5 169550683 169555713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06307 208 326 Calmodulin-binding Proteins AT1G08110 27.586 2.05e-09 55.5