Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06305 ATGGCTTCTTCAATTCGACCTACTCTTTCTCTCCTCAATCGCTCTCCTCGTCTCTCTTTCTCCCGTTTTTCAACCGCAGTAGCAGTAGTTCCACAATCCAAGAGTTTTGGATTGAAAGCGTGTTGTAGAATGATGAGAAAAAATGGGAACTCCGTTAGAGTTATGGCATCTACACCTGTCACTGCTTCACCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGACTTGGATAGAACCATTAAATTCTATACTGAGTGTCTGGGAATGAAGCTCCTTAGGAAGCGTGATATACCGGAGGAGAAGTATACTAATGCTTTTCTTGGATATGGACCGGAGGACTCACACTTTGTTATTGAACTTACATACAATTACGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAGGGGGGCAAAATATCTAGAGAACCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTATTGAGGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGCCCTACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAATCGATCAATCGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGAACACGAGATAATCCAGAGAACAAGTATACCATAGCAATGCTGGGTTATGGTCCTGAAGATAAAACTACTGTTCTGGAGCTGACCTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCAATTAAACTAACCACTGGAAAGGTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGACCCTGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1020 0.4069 MASSIRPTLSLLNRSPRLSFSRFSTAVAVVPQSKSFGLKACCRMMRKNGNSVRVMASTPVTASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDITKTVELIRAKGGKISREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPENKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLTTGKVTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06305 339 Gene3D - 204 339 IPR029068 -
Vivi5g06305 339 PANTHER LACTOYLGLUTATHIONE LYASE 60 339 - -
Vivi5g06305 339 ProSitePatterns Glyoxalase I signature 1. 210 231 IPR018146 GO:0004462|GO:0046872
Vivi5g06305 339 CDD GlxI_Ni 78 199 - -
Vivi5g06305 339 ProSitePatterns Glyoxalase I signature 2. 144 156 IPR018146 GO:0004462|GO:0046872
Vivi5g06305 339 Gene3D - 51 202 IPR029068 -
Vivi5g06305 339 FunFam Lactoylglutathione lyase 74 203 - -
Vivi5g06305 339 NCBIfam lactoylglutathione lyase 77 202 IPR004361 GO:0004462|GO:0046872
Vivi5g06305 339 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 207 331 IPR037523 -
Vivi5g06305 339 ProSitePatterns Glyoxalase I signature 1. 80 101 IPR018146 GO:0004462|GO:0046872
Vivi5g06305 339 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 210 325 IPR004360 -
Vivi5g06305 339 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 198 IPR004360 -
Vivi5g06305 339 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 208 331 IPR029068 -
Vivi5g06305 339 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 77 201 IPR037523 -
Vivi5g06305 339 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 76 206 IPR029068 -
Vivi5g06305 339 FunFam Lactoylglutathione lyase 204 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06305 Vivi-Chr5 169550683 169555713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06305 210 328 Calmodulin-binding Proteins AT1G08110 27.586 1.65e-09 55.8