Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06295 ATGGCTTCGATATTCTCAACAAAAGGTCAAAGGTGGAGTGCTGTTAGAGAATCGGGTCAACTGTTCAGTGAGAGTTGCATGAAATTTATGAAAGAACAATCTACCAAGGCCAACAGTCATCATGTAACTGCTTTCGATCGATTCAACCGTACCTTCAGTGTCCGAGAAACAATTGACCACAATGAAGGATTGTCGAGACAGCAATATCGGGTTCTACTAGATGATCATTGGTGTGACTGTGTATACAGTGTGGCATTTCTAGTGGTGGAAAAGGAGGATTACTGGCCTGAGTATGATGGGGAGTCGCCGCAACTTCAAACAAATTGTTACTTTGCTCAACTTCAAACCAAACTCAAAAACCTAAAAATCAATTGGTCTTCGCCGCAACCTCGCCATAGCCGTAGCCCGTTCCTCGGAGTCCCATCACCGCATCTTCGCCGGTGTTCCGTTGCCGCAACCTCGCCGGAGCACGATTTCGTGAACCCTAGCGCCATCGTCTTCTTCATCTTCACACTTCAACTCAGTCAAGCTGTGCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGAAACCTCAGTCAAAAAACACATTGGAGAATCAAAACTCACCTAGCCATTAGTCATTTGGATGTAAATAAGATCAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAAGTTGCACAGGAGAGTGTTTTTGGACAATATAAACCCTGAAAATCAGGCTCTCATGTGA 765 0.4405 MASIFSTKGQRWSAVRESGQLFSESCMKFMKEQSTKANSHHVTAFDRFNRTFSVRETIDHNEGLSRQQYRVLLDDHWCDCVYSVAFLVVEKEDYWPEYDGESPQLQTNCYFAQLQTKLKNLKINWSSPQPRHSRSPFLGVPSPHLRRCSVAATSPEHDFVNPSAIVFFIFTLQLSQAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNINPENQALM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06295 254 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 176 254 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06295 Vivi-Chr5 169298837 169304288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06295 176 253 Mechanosensitive Ion Channel Family AT5G10490 89.744 7.65e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06295 K22047 - vvo:131605998 525.398