Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06286 ATGGAACGTTTGGACGATTCAGAAGAGCAACTCGAACGAGTTGACTCTGATCAGTTAACATTGACAAGCTCTGGTTCAAGCATTTCGTCGCTATTCAGTACCGATGATTTCCGTTCCGGTGACATTTCCTCTGTTAGCAGTGGCTCAGGTGAGATTCCGATAATTACGGTGAATCGAGTGATTCTTGCGCCGTCGTTGATCGCTGAGAAGAATGAAGGTGAGAGCAACAGCAACAAGGCTGACGTGATGGATGAGGTTGTGGTGACGGCGGTGAGAGAGAAGTGCGTCGGAAGGAGCAACAAGGGAGTTAGTTGGGGACATACTTCAGTGATTGGGAGACGGAAGGAAATGGAGGACGCTGTAGCTGCTATTCCAGGGTTTTTGTCCCGCAGTTGCGATCACGTCGGTGGTTGTACGGCTCCCGGTTCGAGATCCTCCGGTGAGATCGGACCGGTTCATTTCTTCGGCGTTTATGATGGACACGGCGGCTCTCAGGTTGCTAAATTTTGTGCCAAGCGGATGCATGATATTATAGCAGAAGAATGGGACCGAGAAATAGCAGGTGGTACTGAATGGCAGAAAAGATGGGAAGCCGTATTTGCTAATGGCTTTGAGAAGACTGACAGTGAAATTGAATCAGAAGAAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGTCAAATTATTACATCCAACTGTGGCGACTCAAGGGTGGTTCTTTGCCGCAGGACTCAAACAGTTCCATTGACAGTAGATCAGAAGCCTGACAGAGAGGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTAATAAACTGGAATGGAGCTAGGGTATTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTAAGACCATGGATTATTCCAGTGCCAGAGATAACTTTTACAGCAAGAACTGACGAGGATGAATGTTTAATTTTGGCAAGTGATGGACTTTGGGATGTAATGACGAATGATGAAGTAGGAGAAGTTGCGCGCCACATTCTAAGAAGGCGCCGAAGATCCTTGTCAACAGAGGAAATATCACCAACACAGGTTGTTGCTGATAAACTCACTGAAATCGCGATTAGTAGAAATAGTAAAGATAATATTTCAATCATAGTTATTGATCTGAAATCAAAGAGAAAATGTCTGCAAAGGCCTCCTTCAATTTCCTAA 1212 0.4563 MERLDDSEEQLERVDSDQLTLTSSGSSISSLFSTDDFRSGDISSVSSGSGEIPIITVNRVILAPSLIAEKNEGESNSNKADVMDEVVVTAVREKCVGRSNKGVSWGHTSVIGRRKEMEDAVAAIPGFLSRSCDHVGGCTAPGSRSSGEIGPVHFFGVYDGHGGSQVAKFCAKRMHDIIAEEWDREIAGGTEWQKRWEAVFANGFEKTDSEIESEEVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTVPLTVDQKPDREDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNDEVGEVARHILRRRRRSLSTEEISPTQVVADKLTEIAISRNSKDNISIIVIDLKSKRKCLQRPPSIS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06286 403 Gene3D - 93 398 IPR036457 -
Vivi5g06286 403 MobiDBLite consensus disorder prediction 1 15 - -
Vivi5g06286 403 PANTHER PROTEIN PHOSPHATASE 83 389 IPR015655 GO:0004722|GO:0006470
Vivi5g06286 403 SUPERFAMILY PP2C-like 97 390 IPR036457 -
Vivi5g06286 403 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Vivi5g06286 403 Pfam Protein phosphatase 2C 114 382 IPR001932 -
Vivi5g06286 403 SMART PP2C_4 94 387 IPR001932 -
Vivi5g06286 403 CDD PP2Cc 106 389 IPR001932 -
Vivi5g06286 403 FunFam Protein phosphatase 2C 51 97 397 - -
Vivi5g06286 403 ProSiteProfiles PPM-type phosphatase domain profile. 104 389 IPR001932 -
Vivi5g06286 403 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06286 Vivi-Chr5 169193557 169200151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06286 105 399 PP2C-type Phosphatase Gene Family AT4G26080 51.746 9.88e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06286 K14497 - gmx:100793293 597.816