Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06251 ATGGGTAGAACCATAAGGTGGTTCAAGAGTTTTTTTGGGATAAAGAAAGATAGAGATAATCCAAATTCGAATTCTTCGAAATGGAATCCTCCTCTTGAAACATTCTCGAAGAGAGATTCAAGAGGTTTGTGTCATAATCCAGCAACTATACCACCTAACATTTCACCTGCAGAAGCTGCTTGGGTTCAATCGTTCTATTCAGAATCCGAGAAGGAGCAAAACAAGCACGCCATTGCTGTTGCAGCTGCCACAGCAGCAGCTGCAGATGCTGCTGTGGCAGCTGCTCAGGCTGCCGTGGCTGTTGTCAGACTAACCAGCCACGGCAGAGATACCATGTTTGGAGGCAGACACCAGAAATTCGCTGCTGTCAAGATTCAAACCACATTTAGGGGATACTTGGCAAGAAAAGCACTGAGAGCCTTAAAGGGTTTGGTAAAGTTACAAGCACTGGTGAGAGGGTACTTAGTAAGGAAGCAAGCAACAGCAACACTTCACAGTATGCAAGCTCTGATTAGAGCACAAGCAACCGTAAGATCTCATAAATCTCGCGGTCTCGTCATGAACACGAAGAATGAAACGCATAACAGATTTCCAGCACAAGCAAGAAGATCCACGGAAAAGTACAATCACAATGAGAGTAATAGGAATGAGTACACATCTTCAACTCCGGTCCACAGTAGAAGATTATCATCTTCTTTTGATGCTACTGTGAACAACAACGGCAACAACAACAATAACAACAACAGTTATGATATTGGAAGTCCGAAAATAGTAGAAATCGATACTGGAAGACCGAAATCAAGGTCTAGAAGAAGCAACACATCAATTTCCGATTTTGGCGAAGACCAGTCATTTCAAACACCTTCATCTCCACATCCAATTATCCCATCTCAGTTATTCATTCCAAGTCAAAGGAATTTCAGTGAATCAGATTGGGGAATAACAGGTGAAGAATGCAGGTTTTCGACTGCGCAAAGCACTCCGCGTTTCACAAGTTCATGTAGTTGTGGATTTGTGGCACCCTCTACACCTAAAACAGTTTGTGGAGATAGTTTCTACATTGGTGAATATGGTAACTATCCTAATTACATGGCTAATACACAGTCTTTTAAGGCGAAATTGAGGTCTCATAGTGCTCCAAAGCAAAGACCGGAACCGGGTCCAAAGAAGAGGCTTACATTGAATGAACTTATGGAATCTAGAAACAGTTTGAGTGGAGTTAGAATGCAAAGATCTTGTTCACAGATTCAGGATGCTATTAATTTTAAGAATGCTGTTATGAGTAAATTAGATAAGTCCTCTGATTTTGATAGAAACTACTCCAACCAAAGGAGGTGGTAA 1341 0.4169 MGRTIRWFKSFFGIKKDRDNPNSNSSKWNPPLETFSKRDSRGLCHNPATIPPNISPAEAAWVQSFYSESEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGRHQKFAAVKIQTTFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLVMNTKNETHNRFPAQARRSTEKYNHNESNRNEYTSSTPVHSRRLSSSFDATVNNNGNNNNNNNSYDIGSPKIVEIDTGRPKSRSRRSNTSISDFGEDQSFQTPSSPHPIIPSQLFIPSQRNFSESDWGITGEECRFSTAQSTPRFTSSCSCGFVAPSTPKTVCGDSFYIGEYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLTLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKLDKSSDFDRNYSNQRRW 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06251 446 SMART iq_5 140 161 IPR000048 GO:0005515
Vivi5g06251 446 SMART iq_5 117 139 IPR000048 GO:0005515
Vivi5g06251 446 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Vivi5g06251 446 Gene3D - 116 166 - -
Vivi5g06251 446 MobiDBLite consensus disorder prediction 269 296 - -
Vivi5g06251 446 MobiDBLite consensus disorder prediction 214 253 - -
Vivi5g06251 446 MobiDBLite consensus disorder prediction 196 213 - -
Vivi5g06251 446 MobiDBLite consensus disorder prediction 191 296 - -
Vivi5g06251 446 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Vivi5g06251 446 Pfam Protein of unknown function (DUF4005) 328 406 IPR025064 -
Vivi5g06251 446 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
Vivi5g06251 446 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Vivi5g06251 446 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06251 Vivi-Chr5 168644550 168646569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06251 1 409 IQD Protein Family AT3G16490 48.916 4.09e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06251 - - mtr:11413683 742.265