Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06191 ATGGACAATATATCAAAGTCAACAGTTTCTCCCAATCCAATTATTTTGAAGAGTGAGGGCTTACTCAAGTATATACTAGAAACCAGCGTTTATCCACGAGAAGCAGAGATTCTCAAAGAACTAAGGAATGCAACCACAAATCATCCTCTTGGCTTCATGGGCACTTCACCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAACTTTTAAATGCTAAAAAGACAATTGAAATAGGAGTTTTCACCGGATACTCTCTTCTCCTCACCGCACTTAACACTCCTCGTGATGGAAAGATTACAGCTTTGGATCCAGACAGAAAAGCATATGAGATAGGACTTCCATTCATCAAAAAGGCTGGTGTTTTGCACAAGATTGACTACATAGAGTCTCCAGCTTTGCCGGTTCTTGATAAACTCCTACAAGATCCTGCGAATGAAGGGACTTTTGGCTTTGCCTTCGTTGACGCTGACAAAAATAACTACTGGAATTACCATGAGAGGCTTATCAAATTGGTTAAGATTGGCGGGATTGTTGCCTATGATAACACACTTTGGGGAGGAACTGTTGCTTTACCAGAAATGGCAGTGTCAGAACCAAAGAGAGAATGGAGAAGATTCACACTTGCTTTTAACGAAGCAATTTCAAGGGATTCTCGTCTTGAACTTGCTTTTGTTTCAATAGGAGATGGGCTCACTATATGCAGGCGCATTCGCTGA 717 0.417 MDNISKSTVSPNPIILKSEGLLKYILETSVYPREAEILKELRNATTNHPLGFMGTSPDAGQLMALLLKLLNAKKTIEIGVFTGYSLLLTALNTPRDGKITALDPDRKAYEIGLPFIKKAGVLHKIDYIESPALPVLDKLLQDPANEGTFGFAFVDADKNNYWNYHERLIKLVKIGGIVAYDNTLWGGTVALPEMAVSEPKREWRRFTLAFNEAISRDSRLELAFVSIGDGLTICRRIR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06191 238 Gene3D Vaccinia Virus protein VP39 6 238 IPR029063 -
Vivi5g06191 238 Pfam O-methyltransferase 27 237 IPR002935 GO:0008171
Vivi5g06191 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 236 IPR029063 -
Vivi5g06191 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
Vivi5g06191 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06191 Vivi-Chr5 167742116 167743658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06191 15 237 Monolignol Biosynthesis Gene Families AT4G26220 64.574 5.14e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06191 K00588 - gmx:100795229 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06191 5 167742116 167743658 Vivi5g06191 5 167742116 167743658 ECH