Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06170 ATGATTGCGATTCTCAAAGTTCTCATTCTCTGCGATCTACTTCTCTGTTATCCTTCATTCTCTTTCTCTCTCCTTGCGAATAACACGGTGCCGGAGCCGGATTTTGTTTTACCGGAAACTAACCTAACCGCCGTTGGCAATGCCTCGCTTGCGGGATCCAACGAGGATAGTCTCGCTAACATGATTGATCGGGCTCTCGAACGGGAGTTTCCCGAAAATGAACAGAACGAAGGTACTGATGATGCTGGTAGTTTCAACAACAGTGTTGCTGGACAGCAGGCTGTTTTAGAAACTGTTGCTAGAGTTAGGAGCAAGAAAAATGAGAGCAAAGAAGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGACAGTGAGAACCGTGTTGAGGAAACACCAACTTTAATTGATCGAAAGGACAATGTCTTTATCATATCCAATCCCAAATCAAAGTATCCTGTTCTGCAATTGGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATAGCCTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATCTATTAGCAGGATCCATCATTGGACCAGGAGGTTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGGGCAGTGGCTATTCTTGGAGGTCTGCTGCAAATTCTCTTATTTATGTGCATGTGTGGAATAATAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTTTATCCATGTCTTCAACAGCAGTGGTCTTGAAATTCTTAATGGAAAAGAACAGCGTCAATGCCCTTCATGGTCAGGTTATAATTGGAACTCTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCACTGCTTCCTGTCTTGGGTGGAACATCGGGTGTTCTTCAGGGAGTAATATCCATGAGTAAATCGTTGTTGACCTTAATTGCATTTTTGGTCGTTTTGTCAATATTATCTCGTACTTGCGTACCCTGGTTCCTTAAGCTTATGATAAGCTTGTCATCTCAGACCAATGAACTTTATCAACTAGCATCAGTGGCGTTCTGCCTAATGGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCATTCGCCGCGGGAGTAATGATATCAACAACGGATCTTGGTCAACATACGCTTGAACAAGTTGAGCCAATTCGCAACTTGTTTGCTGCTCTGTTCTTGGCCAGTATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCACGTTGACATTTTACTGGCATCTGTTATATTGGTGATCATTGTAAAAACAATTGTAGCCGCATCTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCCATTCTTGTTGGGATGTCCTTGGCTCAAATTGGGGAATTTGCATTTGTTCTTCTCAGTCGTGCTTCGAATGTTCATTTAGTCGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACTGCTCTCAGTCTGGTGACTACACCCTTGCTTTTCAAGCTGATTCCTGCAGTTCTACGTCTTGGTGCATTGCTCCGGTGGTTCCCTCCTGATACTCCTGCTGAGGTTGTCTTTAAAGGGGACAGCTTTCGTGCAGACAGCGCTAAGCGTATTACTTTGATGGTTCAAGGCTCCCATGATTCATGA 1752 0.4292 MIAILKVLILCDLLLCYPSFSFSLLANNTVPEPDFVLPETNLTAVGNASLAGSNEDSLANMIDRALEREFPENEQNEGTDDAGSFNNSVAGQQAVLETVARVRSKKNESKEEKSFQFHDVFNLDSENRVEETPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQILLFMCMCGIIASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMEKNSVNALHGQVIIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMSKSLLTLIAFLVVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLMVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNLFAALFLASIGMLIHVHFLWNHVDILLASVILVIIVKTIVAASVVKGFGYNNKTSILVGMSLAQIGEFAFVLLSRASNVHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVLRLGALLRWFPPDTPAEVVFKGDSFRADSAKRITLMVQGSHDS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06170 583 Gene3D - 159 542 IPR038770 -
Vivi5g06170 583 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 41 574 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vivi5g06170 583 Pfam Sodium/hydrogen exchanger family 166 535 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06170 Vivi-Chr5 167486745 167497711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06170 36 583 Antiporters AT2G19600 82.065 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06170 K26735 - gmx:100788884 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06170 5 167486745 167497711 Vivi5g06170 5 167486745 167497711 ECH