Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06169 ATGATTGCGATTCTCAAAGTTCTCATTCTCTGCGATCTACTTCTCTGTTATCCTTCATTCTCTTTCTCTCTCCTTGCGAATAACACGGTGCCGGAGCCGGATTTTGTTTTACCGGAAACTAACCTAACCGCCGTTGGCAATGCCTCGCTTGCGGGATCCAACGAGGATAGTCTCGCTAACATGATTGATCGGGCTCTCGAACGGGAGTTTCCCGAAAATGAACAGAACGAAGGTACTGATGATGCTGGTAGTTTCAACAACAGTGTTGCTGGACAGCAGGCTGTTTTAGAAACTGTTGCTAGAGTTAGGAGCAAGAAAAATGAGAGCAAAGAAGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGACAGTGAGAACCGTGTTGAGGAAACACCAACTTTAATTGATCGAAAGGACAATGTCTTTATCATATCCAATCCCAAATCAAAGTATCCTGTTCTGCAATTGGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATAGCCTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATCTATTAGCAGGATCCATCATTGGACCAGGAGGTTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGGGCAGTGGCTATTCTTGGAGGTCTGCTGCAAATTCTCTTATTTATGTGCATGTGTGGAATAATAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTTTATCCATGTCTTCAACAGCAGTGGTATCCAGTGCACGCTCTTTAATAATTGTCTTGAAATTCTTAATGGAAAAGAACAGCGTCAATGCCCTTCATGGTCAGGTTATAATTGGAACTCTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCACTGCTTCCTGTCTTGGGTGGAACATCGGGTGTTCTTCAGGGAGTAATATCCATGAGTAAATCGTTGTTGACCTTAATTGCATTTTTGGTCGTTTTGTCAATATTATCTCGTACTTGCGTACCCTGGTTCCTTAAGCTTATGATAAGCTTGTCATCTCAGACCAATGAACTTTATCAACTAGCATCAGTGGCGTTCTGCCTAATGGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCATTCGCCGCGGGAGTAATGATATCAACAACGGATCTTGGTCAACATACGCTTGAACAAGTTGAGCCAATTCGCAACTTGTTTGCTGCTCTGTTCTTGGCCAGTATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCACGTTGACATTTTACTGGCATCTGTTATATTGGTGATCATTGTAAAAACAATTGTAGCCGCATCTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCCATTCTTGTTGGGATGTCCTTGGCTCAAATTGGGGAATTTGCATTTGTTCTTCTCAGTCGTGCTTCGAATGTTCATTTAGTCGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACTGCTCTCAGTCTGGTGACTACACCCTTGCTTTTCAAGCTGATTCCTGCAGTTCTACGTCTTGGTGCATTGCTCCGGTGGTTCCCTCCTGATACTCCTGCTGAGGTTGTCTTTAAAGGGGACAGCTTTCGTGCAGACAGCGCTAAGCGTATTACTTTGATGGTTCAAGGCTCCCATGATTCATGA 1779 0.4283 MIAILKVLILCDLLLCYPSFSFSLLANNTVPEPDFVLPETNLTAVGNASLAGSNEDSLANMIDRALEREFPENEQNEGTDDAGSFNNSVAGQQAVLETVARVRSKKNESKEEKSFQFHDVFNLDSENRVEETPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQILLFMCMCGIIASLCGGKSSEGIFVGAFLSMSSTAVVSSARSLIIVLKFLMEKNSVNALHGQVIIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMSKSLLTLIAFLVVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLMVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNLFAALFLASIGMLIHVHFLWNHVDILLASVILVIIVKTIVAASVVKGFGYNNKTSILVGMSLAQIGEFAFVLLSRASNVHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVLRLGALLRWFPPDTPAEVVFKGDSFRADSAKRITLMVQGSHDS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06169 592 Gene3D - 159 551 IPR038770 -
Vivi5g06169 592 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 41 583 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vivi5g06169 592 Pfam Sodium/hydrogen exchanger family 166 544 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06169 Vivi-Chr5 167486741 167497711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06169 36 592 Antiporters AT2G19600 80.749 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06169 K26735 - gmx:100788884 956.436