Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06154 ATGGCAGGAACAATGAAAAAAGTCGACAAGATTCGCCAAATCGTTCGCTTGAAACAGCTCATGACACGGTGGAAACACCTCAGTCTCCGTCGCCATTCCCTCCGTCCAGAGCCCGAAGAGCCCAGTGTCACTCCTCGACGACAACCGCCGTCCGGCTTCCTCTTCGTCTACGTCGGATCGGAACGGCACCGTTTCGCCATCCCCGCTCGGTTTCTCAACTTCCCCGTTTTCGCCGGTCTTCTCGATGTGACTGAGGAAGAGTTCGGTCTACGAGGTAACGGAGGTTTGGTTCTTCCGTGCGGGTGCAGTTACTGTGCATACATAAAAATCTATGCACGTGCATAG 345 0.542 MAGTMKKVDKIRQIVRLKQLMTRWKHLSLRRHSLRPEPEEPSVTPRRQPPSGFLFVYVGSERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCGCSYCAYIKIYARA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06154 114 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Vivi5g06154 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06154 Vivi-Chr5 167259388 167259732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06154 7 108 Calmodulin-binding Proteins AT3G43120 31.298 1.59e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06154 K14488 - gmx:100797463 142.124