Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06125 ATGGAGCATAATTTCTATCTCTCCCTTCTTCTTCTCTTTGTCTCCTTCATTTCCCTCACTCTCTTTTTCCTCTTCAACAAAACCAAATCTCCATGGAACCTACCACCGGGTAAAATGGGCTACCCGGTGATCGGCGAAAGCCTCGAGTTTTTATCGACCGGATGGAAAGGCCATCCTGAAAAATTCATTTTCGACCGAATGATTCGATACTCGTCTGAACTATTTAAGACATCAATCCTAGGAGAATCTACTGTTGTTTGTTGTGGAGCCGCATGTAACAAGTTTTTGTTTTCAAACGAGAATAAAACGGTTGTAGCATGGTGGCCAGGGAGTGTGGACAAAATATTTCCTAATAATTCGGCTGGAACAGATTCTAAGGAAGAAGCTGTGAGGATGAGAAAAATGCTTCCTCAGTTTCTTAAGCCAGAAGCTTTACAACGTTATGTTGGGATCATGGATACTATTGCTCAAAGACACTTTGCTTCTCTTTGGGAGAATAATGATCAAGTCACTGTTTATCCATTGGCTAAGAGGTATACTTTTTTGTTGGCTTGTCGATTATTCATGAGCGTTGAAGACGAGAACCATGTAGCAAAATTCAGTGATCCATTTCAACTAATAGCGTCCGGAATCATATCCCTACCGCTCAATTTGCCCGGAACGCCATTCAACAAAGCTATAAAAGCCTCAAACTTCATTAGAAAGGAGTTGATGAAGATCATAAAGCAAAGGAGGATGGATTTGGCAGAAGGTGTGGCATCACCAACACAAGACATATTGTCTCACATGTTGTTGGCTTGTGATGAAAATGGAGAGCATATGAATGAACTCAATATTGCTGATAAGATTTTAGGGCTTTTGATAGGAGGACATGACACTGCTAGCATCGCATGCACTTTCGTCGTCAAATATCTCGGCCAGTTACCTCACATTTACGATAAAGTCTATCAAGAGCAAATGGAAATTGCAAATTCAAAACCCCCTGGAGAGTTGTTGAATTGGGATGACCTCAAGAAAATGAAATACTCTTGGAATGTAGCTTGTGAAGTATTGAGAGTTGCACCTCCACTCCAAGGAGGTTTCAGAGAAGCCATCACTGACTTTATGTTCAATGGCTTCTCAATTCCTAAGGGATGGAAGCTGTATTGGAGTATAAATTCAACACATTTGAATCCAGAATGTTTTCCCAAGCCAGAGGAATTTGACCCAACAAGATATGAAGGAAATGGGCCAGCTCCTTACACTTTTGTGCCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATTCTAGTTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAACATGATTCCAGATGAGAAGATTGTTGTTGATCCCTTCCCTATCCCTGCAAACAATCTCCCAATTCGTCTCTTTCCACACAAAGCTTGA 1440 0.4104 MEHNFYLSLLLLFVSFISLTLFFLFNKTKSPWNLPPGKMGYPVIGESLEFLSTGWKGHPEKFIFDRMIRYSSELFKTSILGESTVVCCGAACNKFLFSNENKTVVAWWPGSVDKIFPNNSAGTDSKEEAVRMRKMLPQFLKPEALQRYVGIMDTIAQRHFASLWENNDQVTVYPLAKRYTFLLACRLFMSVEDENHVAKFSDPFQLIASGIISLPLNLPGTPFNKAIKASNFIRKELMKIIKQRRMDLAEGVASPTQDILSHMLLACDENGEHMNELNIADKILGLLIGGHDTASIACTFVVKYLGQLPHIYDKVYQEQMEIANSKPPGELLNWDDLKKMKYSWNVACEVLRVAPPLQGGFREAITDFMFNGFSIPKGWKLYWSINSTHLNPECFPKPEEFDPTRYEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWENMIPDEKIVVDPFPIPANNLPIRLFPHKA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06125 479 CDD CYP90-like 66 476 - -
Vivi5g06125 479 FunFam Taxadiene 5-alpha hydroxylase 25 477 - -
Vivi5g06125 479 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 Pfam Cytochrome P450 35 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 Gene3D Cytochrome P450 25 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 PANTHER CYTOCHROME P450 26 32 465 - -
Vivi5g06125 479 SUPERFAMILY Cytochrome P450 28 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g06125 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06125 Vivi-Chr5 166811061 166815576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06125 33 381 Cytochrome P450 AT5G36110 57.955 1.91e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06125 K20667 - ag:CBN88269 863.218