Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06084 ATGGAATACACTGAAACAAAAGAAAGAATCGAAGAAACAGTTCTGAAGATCTTACAAGAATCAAACATGGATGAAGTCACCGAATCCAAGATTCGAAAGCAAGCCTCCACCGAACTCGACCTCAACCTCTCTCAGCCTCCGTTCAAAGCGTTAGTCAAGCAAATCATCGAAGCTTTTCTCAAGCAGAAGCAGCAAGAGGGAGAGGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAAAGCCAAAGCTCAGACAAGAGGGAGTTTCCAGTAGAAACAATAATGTTTACGATGATTCCGGCGATCTCGTTATCTGTGAGCTTGGGAAAAAGAGAAAAGTGACGATTCAGGATTTTAAAGGGAGAACTTTTGTGTCTATTAGGGAGTTTTATAACAAGGATGGCAAGGAACTTCCTTCTTCTAAAGGAATAAGTTTGACTGGGGAGCAGTGGTCGACCTTTAAGAAAAGTGTGCCAGCCATAGAAAAAGCCATTCAGAAAATGAAGTCGCGCGTATAA 513 0.4133 MEYTETKERIEETVLKILQESNMDEVTESKIRKQASTELDLNLSQPPFKALVKQIIEAFLKQKQQEGEEEEKVEEEEEKPKLRQEGVSSRNNNVYDDSGDLVICELGKKRKVTIQDFKGRTFVSIREFYNKDGKELPSSKGISLTGEQWSTFKKSVPAIEKAIQKMKSRV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06084 170 PIRSF RNA_polymII_KELP 1 170 IPR017415 -
Vivi5g06084 170 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 168 IPR045125 GO:0003713|GO:0060261
Vivi5g06084 170 Gene3D Transcriptional Coactivator Pc4; Chain A 94 170 IPR009044 GO:0003677|GO:0006355
Vivi5g06084 170 MobiDBLite consensus disorder prediction 64 93 - -
Vivi5g06084 170 Coils Coil 56 85 - -
Vivi5g06084 170 Pfam Transcriptional Coactivator p15 (PC4) 104 154 IPR003173 GO:0003677|GO:0006355
Vivi5g06084 170 SUPERFAMILY DEK C-terminal domain 5 60 - -
Vivi5g06084 170 SUPERFAMILY ssDNA-binding transcriptional regulator domain 103 165 IPR009044 GO:0003677|GO:0006355
Vivi5g06084 170 Pfam DEK C terminal domain 5 60 IPR014876 -
Vivi5g06084 170 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Vivi5g06084 170 FunFam RNA polymerase II transcriptional coactivator KELP 93 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06084 Vivi-Chr5 165921003 165923348 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Vivi5g06084 DEK_C 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06084 K25815 - gmx:100305633 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06084 5 165921003 165923348 Vivi5g06084 5 165921003 165923348 ECH