Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06054 ATGACTTCTCATTCATCACCTCCTGAAATTGATATCAAAGCTGAGTATTGTCCGGAAGCTGTGATTGAGTGGCACCGGTTATCAGGTTTAGAAGATCGCAAAGAAAGTCTCAGTAGAAAGGATTTGGCTTTGAAAGCAAAACAACATCTCTTTTATTTAAAGTGGAAGTTTTGGCATGTTAACAAAAAGGGTAAGTGGGAATTGCGTTATACTTCGCCTGTAAATGGAAAAAATTATATATCTCTTAGGAAGGCATGTGAGAGTTGTATTGAAGATGGGGGTTGTTCTACCATACCCTCTTCATCTTCAACAACGGTACAAGTACCATCTACAATAATTTCGTCTCCAGAGAGACCAAAAGATTTTGGCGAAACTGATCAATCAATTTTTAATGAGGATTCTGGGGACTTTACTCTTCAAAAATGCAATGTTACTACAATTGATGGGGGCTATTCAACCATACACTCTTCAACAATCGTGCAAGTACCATTAACTACAACTTTCAATAATGATTCTCAAGTGTTTAGTTTGAGTTCTCTTCAAAAACATAATGATACTACAATTTCTGAAGATGGAGGTCGTCCTATCATACACTCTCCAACAACAATGCAACCACCATCAGTAACAATTTCTTCGTCTCCTTTAAATTTGAAAAAGCGGCCGAGAGATTTTGGAGAAATCGATCAATCAACTTTCAATGAGTATTCTAAAGCCTTTAGTTCGTATTCTCAAAATTGTAATGTTACAGCAATTTCAACATCAAAGATAAATGAACATGTGAGTACTTCTAAATCAGAAGTTACTAAATCACAACGTCCGTATAAAAGACAAAAGATATCAAATATGAGTACAATGGATAAAAATTTAGAGGATTGTGATCAAAATGAAAAAGTACTAAATATGAGTATTTTGGAGGATAATTCAGAAGTCTTTGAAAAAAGAGAAGAGGTACTAAACATGAGTACTAGAGAAGGATGCACATTTATTTCTTCGTTGGTAAAGAATCGAGTTTTGGTTCCAGGGACTAACGTGTTCTGTCGTGGTAGTAACAATATTGTTAAAATTGGGAGTATAGTTTTTGATGGTATTAGTTGTCATTGTTGTCAAGTTAATTTCAATATTACTGAGTTTGAGACGCATGCTGGTTGCACAAGAAATAGTCCGCCCATTAGTATTATGTTGGAAGACGGAAGATCAATGTTGGAATGTCAAAAAGTAACTCTGAATTTGAATTTGCATGATTGA 1245 0.3486 MTSHSSPPEIDIKAEYCPEAVIEWHRLSGLEDRKESLSRKDLALKAKQHLFYLKWKFWHVNKKGKWELRYTSPVNGKNYISLRKACESCIEDGGCSTIPSSSSTTVQVPSTIISSPERPKDFGETDQSIFNEDSGDFTLQKCNVTTIDGGYSTIHSSTIVQVPLTTTFNNDSQVFSLSSLQKHNDTTISEDGGRPIIHSPTTMQPPSVTISSSPLNLKKRPRDFGEIDQSTFNEYSKAFSSYSQNCNVTAISTSKINEHVSTSKSEVTKSQRPYKRQKISNMSTMDKNLEDCDQNEKVLNMSILEDNSEVFEKREEVLNMSTREGCTFISSLVKNRVLVPGTNVFCRGSNNIVKIGSIVFDGISCHCCQVNFNITEFETHAGCTRNSPPISIMLEDGRSMLECQKVTLNLNLHD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06054 414 PANTHER PHD FINGER PROTEIN 12 18 405 IPR042163 GO:0003714|GO:0045892
Vivi5g06054 414 Coils Coil 398 414 - -
Vivi5g06054 414 MobiDBLite consensus disorder prediction 199 221 - -
Vivi5g06054 414 MobiDBLite consensus disorder prediction 200 216 - -
Vivi5g06054 414 Pfam Tify domain binding domain 360 405 IPR032308 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06054 329 404 PHD Transcription Factor Family AT5G58610 39.744 1.95e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06054 - - vvo:131605948 837.41