Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06007 ATGAACGACGAAGATGTCTCCAGTCAAATCCACCAGATGGTGAGGTTTATCCAACAAGAAGCCGAAGAAAAAGCCACCGAGATCTCTGCTTCTGCTGAAGAGGAATTCAATATCGAGAAGCTTCAGTTGGTTGAAGCCGAGAAGAAGAAGATCAGACAGGAATATGAACGCAAAGAGCGCCAAGTTGAAATTCGAAAGAAAATTGACTACTCGATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACATTGTCACTTCCATGAAAGAAGTTGCTGCCAAGGAACTTTTGAATGTGAGCCATCATCACCGTGTTGAGGATATTTTGCATGTGGGTCATCATGAGTACAGGAACCTTCTAAAAGATCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCCTGTTGAGATGCCGGAAACGTGACGTGCACATGATAGAACATGTGCTGGAAGCAGCTGCAGAGGAGTATGCTGAAAGAGCAGGTGTTGTTCCACCAGAGATTATTGTTGACCATGATGTCTATCTTCCACCTGCACCCAAGCATCACCATACTCATGATCCCTACTGCTCTGGTGGGGTAGTGTTGGCCTCTCGCGATGGAAAGATTGTTTGTGAAAATACTCTTGATGCGCGACTGGATGTAGTGTTCCGCAAAAAGCTTCCAGAGATCCGAAAACAACTATTTGGAAAAGTTGCTGTTTGA 723 0.444 MNDEDVSSQIHQMVRFIQQEAEEKATEISASAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIDYSMQLNASRIKVLQAQDDIVTSMKEVAAKELLNVSHHHRVEDILHVGHHEYRNLLKDLIVQSLLRLKEPSVLLRCRKRDVHMIEHVLEAAAEEYAERAGVVPPEIIVDHDVYLPPAPKHHHTHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGKVAV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06007 240 SUPERFAMILY V-type ATPase subunit E-like 109 236 - -
Vivi5g06007 240 Pfam ATP synthase (E/31 kDa) subunit 16 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vivi5g06007 240 Coils Coil 29 61 - -
Vivi5g06007 240 Hamap V-type proton ATPase subunit E [atpE]. 8 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vivi5g06007 240 Gene3D - 93 239 IPR038495 -
Vivi5g06007 240 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 237 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vivi5g06007 240 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06007 Vivi-Chr5 164666295 164669644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06007 1 239 Primary Pumps ATPases(2) AT4G11150 70.711 3.04e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06007 K02150 - gmx:100500452 390.193