Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05991 ATGGAACAGAAAACTCTTCTGATATCAGCCGTGAGTGCCAGTGTTGGACTTGGAGTTGGATTAGGATTGGCCAATTCTAGACAAACCGTTTCTAAATGGGGACCTAATTACTCTTACTCATCTTCAAACTCCGTTACTGCTAATCAAATTGAGCAAGAAATGATTCGGCAAATTATTGATGGCAGAGATAGTAACGTTACTTTCGATAAATTTCCTTATTACCTAAGTGAGGAGACGCGAGTTTTGCTTACAAGTGTTGCTTATGTTCATTTGAAGCATGCTGAAGTTTCTAAATATACTCGGAATCTCGCCCCGGCGAGTAGAACCATTCTTCTCTCAGGACCAGCTGAACTTTACCAGCAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTACTTCTCTTGGATTTAACTGAATTTTCATTGAAGATTCAGAGTAAATATGGTTCTGGCAACAAAGAATATTCTTTCAAAAGATCTACTTCAGAGTCAACTTTGGAGAAGCTATTTGGGTCATTTTCAATCTTTTCGCAAAGGGAGGAACCTAAAGTTGCAGGAAAAATGCACAAGCAAAGAAGTGGAGTGGACCTACAATCAATGGGCGATGAGACATCTTGTAATCCTCCGAAGCTCCGTAGGAATGCTTGTTCCACCTCAAATATTAGTGGCCTTACTTCTCAAAGCAATCCTACAAATTCAGCTCCTTTGAAGCGCACAGCCAGCTGGTCTTTCGACGAAAAATTACTTATGCAGTCTCTTTACAAGGTTCTACTTTCTGTGTCAAAAACCTACCCCATTGTGCTATATCTGAGGGACGTTGATAGGTTATTATGTAGATCACAAACCATATACAACATGTTCCAAAAAATGTTGAAGAAACTCTCTGGCCCGATTCTGATTCTCGGTTCGCGAGTTCTAGATTCTAGTAATGACTTTGAAGAGATGGATGAGAAACTTAATTTGCTCTTCCCGTACGATATAGAAATCAAACCTCCAGAAGACGAATCACATCTTGTCAGCTGGAAGTCTCAATTGGAAAAGGATATGAAGATGATACAAGTTCAGGATAACAAGAATCATATCACGGAAGTGCTTGCAGCCAATGATCTTGATTGCGATGACTTGGATTCCATCTGTGTGGAAGACACAATGCTTCTCAGTAACTATATAGAAGAGATTATCGTGTCAGCGATCTCTCATCATTTGATGAAAAACAAAGATCTTGAGTACAGAAACGGAAAGCTCGTTATTTCTTGCAATAGTTTGTCGCATGCATTGGGTATATTCCGAACGGCAAAATTCAGTGGAAGAGATACATCAAAACTGGAAGATCAAGAACTAAAATCTGAGATTCCGAGTGAGGTAGAAACTGTTCCGGAACCAGCAGTGAAGGCTGAAAAGAAGGATGCAAGTGTTGCTCCTGAAAAGAAGGCTGAAAGTGTTGTTCCTGAAAAGAAGGCTGAAAATGTTGCTCCTGAGAAGAAGGCTGCAGCAGAAATATCAACTTCAGCAGCAAAGGCAGGTGTTGAAAAATCGGTTCCACCGACAAAAACTGCTGAAGTTCCTGCCGATAACGAGTTTGAGAAGCGAATAAGGCCTGAAGTCATACCAGCAAATGAGATTGATGTAACATTCGCCGATATTGGTGCCTTAGAAAAAACAAAAGAATCCCTTCAAGAGTTAGTAATGCTTCCTCTCCGAAGGCCGGACCTTTTCACCGGAGGACTTCTTAAACCATGCAGAGGAATATTGCTATTCGGACCTCCTGGAACTGGGAAAACAATGCTGGCAAAAGCCATTGCAAAGGAAGCTGGAGCAAGTTTCATCAATGTATCCATGTCTACCATTACTTCTAAATGGTTCGGTGAAGATGAGAAAAACGTTCGCGCTTTATTCACACTAGCATCCAAAGTCTCTCCAACTATTATATTTGTCGACGAGGTCGATAGCATGCTCGGGCAACGATCAAGACACGGGGAGCATGAAGCTATGCGGAAAATAAAGAACGAATTTATGTCTCATTGGGACGGGCTCACCACAAAACAAGGAGAGCGCATCCTTGTTCTTGCAGCAACCAATAGGCCATTTGACTTGGATGAAGCTATTATAAGACGATTCGAAAGGAGAATTATGGTAGGACTGCCATCAGTTGAGAACAGGGAAAAGATATTGAGAACTCTCTTGGCAAAAGAAAAGGTTGACGCGGAAATTAATTTTAAGGAACTCGCAACCATGACAGAAGGATATACAGGAAGTGATCTTAAGAATATTTGCACAACCGCTGCTTATAGGCCTGTTAGAGAGTTGATTCAGCAAGAGAGGTTAAAGAATCTGGAGAAGAAACAGAAAGTGAACAAGGGACAGAACAATAATACCCAAGAAGCAGAAGAGGAAGTTCAACAAGAAAGAGTTATTACCCTTAGGCCATTGAATATGCAGGATTTCAAAGAGGCTAAGAGTCAGGTTGCTGCAAGCTTCTCTGCTGAGGGTGCTGGAATGGGCGAGTTGACTCAGTGGAATGAGTTGTATGGAGAAGGAGGTTCTAGGAAGCAAAAACAGTTGACATACTTCCTATGA 2586 0.4145 MEQKTLLISAVSASVGLGVGLGLANSRQTVSKWGPNYSYSSSNSVTANQIEQEMIRQIIDGRDSNVTFDKFPYYLSEETRVLLTSVAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTEFSLKIQSKYGSGNKEYSFKRSTSESTLEKLFGSFSIFSQREEPKVAGKMHKQRSGVDLQSMGDETSCNPPKLRRNACSTSNISGLTSQSNPTNSAPLKRTASWSFDEKLLMQSLYKVLLSVSKTYPIVLYLRDVDRLLCRSQTIYNMFQKMLKKLSGPILILGSRVLDSSNDFEEMDEKLNLLFPYDIEIKPPEDESHLVSWKSQLEKDMKMIQVQDNKNHITEVLAANDLDCDDLDSICVEDTMLLSNYIEEIIVSAISHHLMKNKDLEYRNGKLVISCNSLSHALGIFRTAKFSGRDTSKLEDQELKSEIPSEVETVPEPAVKAEKKDASVAPEKKAESVVPEKKAENVAPEKKAAAEISTSAAKAGVEKSVPPTKTAEVPADNEFEKRIRPEVIPANEIDVTFADIGALEKTKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRSRHGEHEAMRKIKNEFMSHWDGLTTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDAEINFKELATMTEGYTGSDLKNICTTAAYRPVRELIQQERLKNLEKKQKVNKGQNNNTQEAEEEVQQERVITLRPLNMQDFKEAKSQVAASFSAEGAGMGELTQWNELYGEGGSRKQKQLTYFL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05991 861 ProSitePatterns AAA-protein family signature. 689 708 IPR003960 GO:0005524|GO:0016887
Vivi5g05991 861 Pfam ATPase family associated with various cellular activities (AAA) 586 716 IPR003959 GO:0005524|GO:0016887
Vivi5g05991 861 MobiDBLite consensus disorder prediction 783 803 - -
Vivi5g05991 861 Coils Coil 781 801 - -
Vivi5g05991 861 MobiDBLite consensus disorder prediction 200 215 - -
Vivi5g05991 861 MobiDBLite consensus disorder prediction 195 215 - -
Vivi5g05991 861 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 545 720 - -
Vivi5g05991 861 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 860 - -
Vivi5g05991 861 MobiDBLite consensus disorder prediction 463 496 - -
Vivi5g05991 861 Pfam AAA+ lid domain 740 782 IPR041569 -
Vivi5g05991 861 Gene3D - 718 823 - -
Vivi5g05991 861 MobiDBLite consensus disorder prediction 442 498 - -
Vivi5g05991 861 Gene3D - 49 358 IPR027417 -
Vivi5g05991 861 SMART AAA_5 582 719 IPR003593 GO:0016887
Vivi5g05991 861 MobiDBLite consensus disorder prediction 220 239 - -
Vivi5g05991 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 545 828 IPR027417 -
Vivi5g05991 861 Gene3D - 545 832 IPR027417 -
Vivi5g05991 861 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05991 Vivi-Chr5 164439508 164444823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05991 546 789 Calmodulin-binding Proteins AT3G56690 37.652 6.64e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05991 - - gmx:100807464 1302.73