Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05958 ATGATCATAACAGAGAAAAATCGCAAAGAAATCTGCAAATACCTCTTCCAAGAGGGTGTTTGCTATGCTAAGAAAGATTTCAACTTGGCAAAGCACCCAGAAATCGATGTTCCTAATTTGCAGGTGATTAAGCTTATGCAGAGCTTCAAATCAAGGGAGTATGTTAGGGAAACCTTTGCGTGGATGCATTATTACTGGTTCCTGACTAATGATGGAATTGAGTTTCTAAGAACTTATTTGAATCTTCCTTCGGAAATTGTGCCTGCTACTTTGAAGAAACAGGCTAAGCCTGCTGGGAGACCTTTCGGTGGTCCACCCGGTGATCGCCCTAGGGGTCCACCAAGATTTGAAGGAGAACGTAGATTTGGAGGTGACCGTGATGGGTACCGTGGAGGTCCAAGAGCACCTGGTGGTGAATTTGGAGGAGATAAGGGAGGTGCTCCTGCTGATTACAGACCCTCATTTGGGGGTCCTGGTGGAAGGCCTGGATTTGGTCGTGGATCTGGTGGTTTTGGTGCACCAACAAGTTCAAATGATGCTTAA 543 0.4586 MIITEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRAPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05958 180 MobiDBLite consensus disorder prediction 112 128 - -
Vivi5g05958 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Vivi5g05958 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Vivi5g05958 180 MobiDBLite consensus disorder prediction 91 180 - -
Vivi5g05958 180 FunFam 40S ribosomal protein S10 1 104 - -
Vivi5g05958 180 Gene3D - 1 104 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05958 Vivi-Chr5 163867011 163869102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05958 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.581 6.66e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05958 K02947 - gmx:100500445 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03906 2 151109123 151110990 Vivi5g05958 5 163867011 163869102 PCT