Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05924 ATGGAGTTCTGGTTCATTGCCCTAGTTTCTCTCTGTGTGGGCTTTCTCATCAGAGCCACCGTCTCCGTCACCGGAGGAAACACGAAGCGCGCCAGCCTCCCTCCCGGCCCTCTCCACATACCCATCCTATCAACCATCTTCTGGCTTAGAAAATCCTTATCCCAAATCCAATCCTTCCTCCGAACCAGCCATGCAAAATATGGCCCAATCATCAGCTTCCGAATCGGTTCCCAACCGAACGTATTCATTTCCGACCGATTCGTTGCCTATAATGCCCTAATCCAGAACTCCTCCGTCTTCTCTGAACGTCCTAAAGCACCTCCTAATGGGAAACTTCTCTCCAGCAACCAACACACCATCAACTCAGCTTCGTACGGAGCCACATGGCGCACTCTCCGTCGTAACCTCGCCGCGGAGATGCTTCACCCGTCTCGCGCTAAGTCTTTCTCCGAGATTCGCCGCTGGGTTCTTCAAACACTCGTCGATCGCGTGAAATCATCTTCGGAATCCAGTGATTCTATCAAAGTCGTTGATCATATTCATTATGCAATGTTTTGCTTACTTGTTTTCATGCTTTACGGAGAAAGAGTTAATGATGAAACAATCAATCATATTGAGCGTGTTCAACGTGCACTTATATTGAGTCTCAATAAATTCAACGTTCTGAATCACTTTCCGAGAATCACTAGGGTTTTGTTCCGGAAACGATGGGAGGAGTTGTTGAAGTTGAAACAAGATCATGATGATGTTCTAATTACACTGATAATAGCAAGGAAGCAAGCCAAGGAGAGTGGATCGATCAAAAACAACGTTGTTTCGTACGTAGATACTCTTCTGGAATTGGAGTTACCTGAGGAGAAACGTAAATTGAATGAAGATGAAATGGTTAGTCTTTGTTCAGAGTTTTTGAATGCAGGTACAGACACAACCTCCACAGCTTTGCAATGGATCATGGCTAATTTGGTGAAGTATCCAGAGGTTCAAAACAAGATTGTGGAGGAGCTTAAAGCGGCGTTTGGCGCTGAAAGAAATGAAGAGAATGCTGAAGTGAAGGAGGAGGACTTGCACAAACTGCCGTATCTCAAGAGTGTGATATTAGAAGGATTGAGACGTCATCCACCGGCGCATTTTGTGTTGCCTCATACAGTCAAAGAAGATGTGGTTTTGAATGGCTATTTGGTGCCTAAAGATGGGATAGTGAATTTCATGGTGGCGGATATAGGGCGGGATCCTCAAGTTTGGGAAGATCCGATGGCGTTTAAGCCGGAAAGGTTTATGAAGGATGAGACATTTGATATTACTGGGAGTAAAGAGATAAAGATGATGCCATTTGGAGTTGGGAGGAGAATTTGTCCTGGATATAATCTAGCTATGCTCCATTTGGAATACTTTGTGGCTAATTTGGTTTGGAATTTTGAGTGGAAGCTTCCGGAGGGAGGGGATGTTGATTTGTCTGAAAAGCATGAGTTCACAGTGGTGATGAAGAATCCTTTGCAGGTTCATGTTTCTCCAAGGGTCTAG 1521 0.4484 MEFWFIALVSLCVGFLIRATVSVTGGNTKRASLPPGPLHIPILSTIFWLRKSLSQIQSFLRTSHAKYGPIISFRIGSQPNVFISDRFVAYNALIQNSSVFSERPKAPPNGKLLSSNQHTINSASYGATWRTLRRNLAAEMLHPSRAKSFSEIRRWVLQTLVDRVKSSSESSDSIKVVDHIHYAMFCLLVFMLYGERVNDETINHIERVQRALILSLNKFNVLNHFPRITRVLFRKRWEELLKLKQDHDDVLITLIIARKQAKESGSIKNNVVSYVDTLLELELPEEKRKLNEDEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPEVQNKIVEELKAAFGAERNEENAEVKEEDLHKLPYLKSVILEGLRRHPPAHFVLPHTVKEDVVLNGYLVPKDGIVNFMVADIGRDPQVWEDPMAFKPERFMKDETFDITGSKEIKMMPFGVGRRICPGYNLAMLHLEYFVANLVWNFEWKLPEGGDVDLSEKHEFTVVMKNPLQVHVSPRV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05924 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vivi5g05924 506 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 498 - -
Vivi5g05924 506 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 CDD CYP77_89 66 499 - -
Vivi5g05924 506 FunFam Cytochrome P450 family protein 27 506 - -
Vivi5g05924 506 Pfam Cytochrome P450 34 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05924 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05924 Vivi-Chr5 163496990 163498690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05924 1 505 Cytochrome P450 AT1G64940 54.864 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05924 K24184 - gmx:100788826 701.819