Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05914 ATGGCACCATGGTGGGGAAAGCCTTCGTCCAAAGAGGTTAAGAAGAAGAAGACAAACCGGGAAAGTATTTTTGATATGATACAGCGAAAATTGAAAAATGTTTCTGAAGTGAAGAGCAACTATAAATCAGGAGGGTCTCGGGGACATCGTAGTTGCAGTATCTCTAAGAAGGGATCTAGATCATTCGGACCTTCAACAAGATCATCATCGTCCTCTCCAACTGTGTCCCGCTGTCTAAGTTTTGCAGACCATCATTATTCTCGGCCATACCCAGTGATAGGCTCGCCCCTTCATACTGTTAGTAATGCAAGTTCTGGAATTATTTTAACATCAAAACTGGAAAGAGCCACAGAAGATCCTACATCTAGACCATCTATATATTTTCCCCTTCCAGAACCTGGTTATCTGACTATGAAAATAGAAACAGAGCCACCATTAACAGACGTGGAAGGAGATCTAGTGACTGCATCTGTTTCCTGTGACAGCTCTATTGATAGTGGTGACTCGTCTGATTCACATCTTGTTAGTCCTCTGGCATCTGACTGTGAAAATAGAAACAGAGCCACCATTAACACTTCTAAAAGTGTGGCGAACAGAGATCAGTCACGGACTACTATCCAAAGAAACTCAAGAGCATCCTCAAAACCAGGTCATAAACTGCGCAACAATAAGCCACTGTCTAGCTCGCCAAAAGGGGTTCCTTTGCATCTGCAAATAGGTCGTGCAGGTGGTTTTTGCAGTGCACCAGATAGTTCAATGTCTAGTCCTAGAAGTCCAATGCGAGCATTAGGTCTAGAGCAAATGCGAGCATTTGGTCCAGAGCAAATGCTAAATTCAGGATTATGGACAGGGAAGCCTTATCCAGATATAGCTTCTGGGCACTGCTATAGTCCAGTTTCAGGCCATAATTCTAGTAATAATTCAGTTGGTGGGGATCCGTCGGCATTTAGGGCACCCAACAAGTGTAGTGCTGAGTGTTCCCCAATACCTAGTCCCAGGATGACAAGCCCTGGCCCTAGTTCCAGGATACAGAGCAGTAATGTCAGTCCTCTGCATCCAAAGGCTGGAGGTGCAGCAGCAGAGTTGCCTACTAGAAGACCTGATGTCAATAAACAACAAAGTCATCGGTTACCACTTCCTCCAATAAAAGTGACTAAACCTTGTCCATTTTCTCCTACCTATTCTGTGTCTTCAACTCCTTCAGCCCCTAGAAGTCCTGCCAGACCAGAAAATTCAACAAGCCCAGGTTCACGCTGGACAAAAGGACATTTGCTTGGAAGGGGAACATTTGGACATGTTTATCTTGGTTTCAGCAGAGAAAGTGGCGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCAGATGACCCTAAATCACGGGAATGTGCGCTACAACTTACCCAAGAAATTGCACTGCTAAGTCACTTGCGGCATCCAAATATAGTCCAGTATTATGGGTCTCAAACGGTAGATGACAGACTTTATATATACTTAGAGTACGTCTCTGGTGGGTCTATCTATAAACTGCTTCAAGAATACGGACAGTTAGGTGAAATTGCGATTCGGAATTACACCCGGCAAATTCTTTCAGGACTTGCATATTTGCACGCAAAGAACACTGTTCACAGGGACATCAAAGGAGCAAACATATTGGTGGACCCTAATGGACACATAAAACTGGCAGATTTTGGGATGGCAAAGCATATAAGTGGACAGTCTCTTGCATTTTCTTTTAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAGAAATTCAGGTGGTTGTAATCTTGCTGTTGATATATGGAGTCTGGGCTGCACTGTTCTGGAGATGGCAACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCCATGTTTAAGATTGGAAACAGCAGGGAACTTCCTAAAATTCCAGATCATCTATCAGAAGAAGGGAAAAGTTTTGTCAGGCTTTGTTTGCAAAGAAATCCACTAGATCGGCCTTCAGCTGGTCAACTTCTAGAGCACCCATTTGTTAAAAGTGCTTATCTGGAAAGACACTTTCTGAATGCTGATCCTTCAGAATCCCCATCTTCTGTTATGAATGCAATGAGATCACTGGCAATTGGATCTCCCAAACATAAACTATGTTTAGACTCGGAAGAAGTAGCTGGTATCCATGGTATCCCTCCAGCTAGAAACTTCAGAACCGGATATGAATCAAGTTATGCTCATAAATCAAGGATCGTTTCATGTCCCGTTTCTCCATCTGATGGACTGCGTGTGCCTCCCAGAACAATAAATCCGAGTGGCAGGATATCTCGCTCTCCAACGCCTAAACCTCATACCGCATCTGGCCCTTCTACTCCATGTCCCGTTTCTCCATCTGATGGACTACGTGTGCCTCCCACAACAATGAATCTGAGTAGCAGGATACCTCGCTCTCCAACGCCTAATACTCATACCGCACCTGGCCCTTCTACTCCGCAAATCTGTATCTGTAGATGTGGGGCAAACCCATATTATCAAACAAAGCAGCAACCTATATTCCCTCATGAACTGGGTATGACCCATAAATCTCCTACTGGTAATCAGTCAAATAGAAGAACTGTTTGTCAATGTCAGGGTTCAAAGCATGGTCAGTTACAAAGAAATACGAAACCCACCATTCAGTCAAATGGAGGCGCTGCTTGTCAATGTCAGTGTTCAAAGCATGGTCAGATTCAAAGAAATATGCAGCAACATAGACAACAACCTTGCTGCCCCCGGGATATAATTTCACCTGAAAATAATGCTGTTGCAAACCATAGTAGGAGAGCCGTAGAGGGAGTCCCAAGAGAATCTCGTAATGGGAGGTCGAGTAATTGTGTGTCCCGACAACAGCGGGTGAGAGATAATGTGCGGCCAAATGCATCTCGTAAGTCAAGTGCACCAGTGGTTGATCGCACTAATGGCCTGTGA 2949 0.4435 MAPWWGKPSSKEVKKKKTNRESIFDMIQRKLKNVSEVKSNYKSGGSRGHRSCSISKKGSRSFGPSTRSSSSSPTVSRCLSFADHHYSRPYPVIGSPLHTVSNASSGIILTSKLERATEDPTSRPSIYFPLPEPGYLTMKIETEPPLTDVEGDLVTASVSCDSSIDSGDSSDSHLVSPLASDCENRNRATINTSKSVANRDQSRTTIQRNSRASSKPGHKLRNNKPLSSSPKGVPLHLQIGRAGGFCSAPDSSMSSPRSPMRALGLEQMRAFGPEQMLNSGLWTGKPYPDIASGHCYSPVSGHNSSNNSVGGDPSAFRAPNKCSAECSPIPSPRMTSPGPSSRIQSSNVSPLHPKAGGAAAELPTRRPDVNKQQSHRLPLPPIKVTKPCPFSPTYSVSSTPSAPRSPARPENSTSPGSRWTKGHLLGRGTFGHVYLGFSRESGEMCAMKEVTLFSDDPKSRECALQLTQEIALLSHLRHPNIVQYYGSQTVDDRLYIYLEYVSGGSIYKLLQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGHIKLADFGMAKHISGQSLAFSFKGSPYWMAPEVIRNSGGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSRELPKIPDHLSEEGKSFVRLCLQRNPLDRPSAGQLLEHPFVKSAYLERHFLNADPSESPSSVMNAMRSLAIGSPKHKLCLDSEEVAGIHGIPPARNFRTGYESSYAHKSRIVSCPVSPSDGLRVPPRTINPSGRISRSPTPKPHTASGPSTPCPVSPSDGLRVPPTTMNLSSRIPRSPTPNTHTAPGPSTPQICICRCGANPYYQTKQQPIFPHELGMTHKSPTGNQSNRRTVCQCQGSKHGQLQRNTKPTIQSNGGAACQCQCSKHGQIQRNMQQHRQQPCCPRDIISPENNAVANHSRRAVEGVPRESRNGRSSNCVSRQQRVRDNVRPNASRKSSAPVVDRTNGL 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05914 982 MobiDBLite consensus disorder prediction 185 213 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 749 822 - -
Vivi5g05914 982 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Vivi5g05914 982 MobiDBLite consensus disorder prediction 944 982 - -
Vivi5g05914 982 Gene3D Transferase(Phosphotransferase) domain 1 417 701 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 321 423 - -
Vivi5g05914 982 SMART serkin_6 419 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05914 982 MobiDBLite consensus disorder prediction 336 351 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 796 814 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 185 234 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 37 74 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 36 74 - -
Vivi5g05914 982 CDD STKc_MEKK1_plant 418 675 - -
Vivi5g05914 982 SUPERFAMILY Protein kinase-like (PK-like) 417 676 IPR011009 -
Vivi5g05914 982 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 66 683 - -
Vivi5g05914 982 MobiDBLite consensus disorder prediction 390 419 - -
Vivi5g05914 982 FunFam Mitogen-activated protein kinase kinase kinase 417 699 - -
Vivi5g05914 982 ProSiteProfiles Protein kinase domain profile. 419 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05914 982 Pfam Protein kinase domain 420 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05914 982 MobiDBLite consensus disorder prediction 927 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05914 Vivi-Chr5 163329573 163336543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05914 3 786 MAP Kinase Kinase Kinase AT1G63700 57.412 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi5g05914 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05914 K20717 - gmx:100814422 1016.91