Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05911 ATGGCGCGAAGATCTCCTCGTCTGGTAAACCAAAAATGCGAAACAGGTTGCACATCCCGAATGTTTGGAATCTTTAACTTTCATGAAGCTCGTTCTGATAGAAGATTGGTTTCCAATGGTAGCCATTTGAATAAACACACCACTGGTCAGAGAAATGGAAAATCCAAAATTAACTCGGATGTGCTTAGCACGGTCGATGAAAAGTACCCTCATGCTGCTGATGCAAGTTCGAGAAGAAAAAGAGGTTTAAGTTGTAAGAATATCTGCGTGGAGGATAATCAGATTGCAGATTTGGAAAAGGAAGTAACGAAAATGATTGTTAATCAAAGATTTTTTGACAAAAACTCTCGAGGCAAAGACGGTGTAGACTGTCAGCCTAATCAGTTCTTAGATGCTGTACAGATTTTATATTCAAACAAGGAACTTTTTGTTAAGCTTCTGCAAGATCCAAACTCTCTGTTGGTGAAACAGATTCATGACTTACAGAAATCTCAAGTGAAAGCGGAACAAAATGGAATGACTAGATTGAATAAAGCTCAAAACAGTGGCAGTTTTGTTGATAGGTCTAAATCGAGTTCAGATTGCGAGACTCAGTCCTCTAAAAGAATAGTAGTTTTGAAGCCTAAGATGAGTAATGTGAAAGAAATTGCTGACAGTAGATATGTGCTTATGAGTGGATCACTAGTACAAGCTATACATGATCAATTTGAAGAGAACCATCTTGCAGACATTGCAACATTCTCTTTGGATCCAATGAACAAATCAAATGACATCATAAGTGAAGTTCTGCAGGCTTTCAGCTTGAAATGCGATGAACCGATAAAGAGTTATTTATCAAACCTTTTGACGGATTCATCCACTTTTGAAGAACTGAATGGATTAACTGACCAACTTTCTGACAGTAAAATCTTGCATGACTGTATCATCCAATGTTTCATGGACTTATACCAGAGCAGTGGTTTTCTACCTCAATTTTCATCAAGAAATTCAAACTTCTTCCAACCATGTGTTGTGAAGAAAATTTTGGTTAGAGAAATTAATGAACTTGTTAACCTGCACTTTGCTCCTCGTCAATCACCAATAACGTTACAGCAGGTTGTTGAAAAGGACTTAGGAAGACGTGGATCATGGATGAATATCCATGTGGATACAGAAGACATTGCAATTGAAGTGGAGGAAGATGTTTTGGAAAAACTGGTTTTGGAAATAGTCTCTGATATGGATATCAGAGACTTGATACAATGCAATGAAACTATGTCAAAATCATAA 1269 0.3719 MARRSPRLVNQKCETGCTSRMFGIFNFHEARSDRRLVSNGSHLNKHTTGQRNGKSKINSDVLSTVDEKYPHAADASSRRKRGLSCKNICVEDNQIADLEKEVTKMIVNQRFFDKNSRGKDGVDCQPNQFLDAVQILYSNKELFVKLLQDPNSLLVKQIHDLQKSQVKAEQNGMTRLNKAQNSGSFVDRSKSSSDCETQSSKRIVVLKPKMSNVKEIADSRYVLMSGSLVQAIHDQFEENHLADIATFSLDPMNKSNDIISEVLQAFSLKCDEPIKSYLSNLLTDSSTFEELNGLTDQLSDSKILHDCIIQCFMDLYQSSGFLPQFSSRNSNFFQPCVVKKILVREINELVNLHFAPRQSPITLQQVVEKDLGRRGSWMNIHVDTEDIAIEVEEDVLEKLVLEIVSDMDIRDLIQCNETMSKS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05911 422 MobiDBLite consensus disorder prediction 37 60 - -
Vivi5g05911 422 Pfam Domain of unknown function (DUF4378) 259 402 IPR025486 -
Vivi5g05911 422 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 93 - -
Vivi5g05911 422 Pfam Protein of unknown function (DUF3741) 109 152 IPR022212 -
Vivi5g05911 422 MobiDBLite consensus disorder prediction 41 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05911 Vivi-Chr5 163307999 163309976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05911 257 414 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 31.250 1.11e-12 68.2