Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05910 ATGGCGCGAAGATCTCCTCGTCTGGTAAACCAAAAATGCGAAACAGGTTGCACATCCCGAATGTTTGGAATCTTTAACTTTCATGAAGCTCGTTCTGATAGAAGATTGGTTTCCAATGGTAGCCATTTGAATAAACACACCACTGGAAATGGAAAATCCAAAATTAACTCGGATGTGCTTAGCACGGTCGATGAAAAGTACCCTCATGCTGCTGATGCAAGTTCGAGAAGAAAAAGAGGTTTAAGTTGTAAGAATATCTGCGTGGAGGATAATCAGATTGCAGATTTGGAAAAGGAAGTAACGAAAATGATTGTTAATCAAAGATTTTTTGACAAAAACTCTCGAGGCAAAGACGGTGTAGACTGTCAGCCTAATCAGTTCTTAGATGCTGTACAGATTTTATATTCAAACAAGGAACTTTTTGTTAAGCTTCTGCAAGATCCAAACTCTCTGTTGGTGAAACAGATTCATGACTTACAGAAATCTCAAGTGAAAGCGGAACAAAATGGAATGACTAGATTGAATAAAGCTCAAAACAGTGGCAGTTTTGTTGATAGGTCTAAATCGAGTTCAGATTGCGAGACTCAGTCCTCTAAAAGAATAGTAGTTTTGAAGCCTAAGATGAGTAATGTGAAAGAAATTGCTGACAGTAGATATGTGCTTATGAGTGGATCACTAGTACAAGCTATACATGATCAATTTGAAGAGAACCATCTTGCAGACATTGCAACATTCTCTTTGGATCCAATGAACAAATCAAATGACATCATAAGTGAAGTTCTGCAGGCTTTCAGCTTGAAATGCGATGAACCGATAAAGAGTTATTTATCAAACCTTTTGACGGATTCATCCACTTTTGAAGAACTGAATGGATTAACTGACCAACTTTCTGACAGTAAAATCTTGCATGACTGTATCATCCAATGTTTCATGGACTTATACCAGAGCAGTGGTTTTCTACCTCAATTTTCATCAAGAAATTCAAACTTCTTCCAACCATGTGTTGTGAAGAAAATTTTGGTTAGAGAAATTAATGAACTTGTTAACCTGCACTTTGCTCCTCGTCAATCACCAATAACGTTACAGCAGGTTGTTGAAAAGGACTTAGGAAGACGTGGATCATGGATGAATATCCATGTGGATACAGAAGACATTGCAATTGAAGTGGAGGAAGATGTTTTGGAAAAACTGGTTTTGGAAATAGTCTCTGATATGGATATCAGAGACTTGATACAATGCAATGAAACTATGTCAAAATCATAA 1263 0.3713 MARRSPRLVNQKCETGCTSRMFGIFNFHEARSDRRLVSNGSHLNKHTTGNGKSKINSDVLSTVDEKYPHAADASSRRKRGLSCKNICVEDNQIADLEKEVTKMIVNQRFFDKNSRGKDGVDCQPNQFLDAVQILYSNKELFVKLLQDPNSLLVKQIHDLQKSQVKAEQNGMTRLNKAQNSGSFVDRSKSSSDCETQSSKRIVVLKPKMSNVKEIADSRYVLMSGSLVQAIHDQFEENHLADIATFSLDPMNKSNDIISEVLQAFSLKCDEPIKSYLSNLLTDSSTFEELNGLTDQLSDSKILHDCIIQCFMDLYQSSGFLPQFSSRNSNFFQPCVVKKILVREINELVNLHFAPRQSPITLQQVVEKDLGRRGSWMNIHVDTEDIAIEVEEDVLEKLVLEIVSDMDIRDLIQCNETMSKS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05910 420 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 90 - -
Vivi5g05910 420 Pfam Protein of unknown function (DUF3741) 107 150 IPR022212 -
Vivi5g05910 420 Pfam Domain of unknown function (DUF4378) 257 400 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05910 Vivi-Chr5 163307999 163309980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05910 255 412 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 31.250 1.14e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05910 - - vvo:131608058 816.609